Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01154 ATGTCCTTCAATCAATCAAAGTCCGATAAGAGCGACGCTGTGTACCGAAAATCCGGGCGATCCGCCAGCTTCAATCAGCAGCGAGGTTCCTCCGGCGGTGCGTACGGCAAGGCcggcggcggcggtggcggcgccggGCCTTCTCCGTCGCTCTCCTCTAGCCGGAGTTTTAACAAGAAGTCTAATAATAATGCACAAGGTGGGCAATCTAGGGTAAACCCTGCACCGTTGAATTCAGCTGAGTCTAATAGTACTTATGCAGCCCGGACTGTACCGAATGGTTCCCATGTACAGCCGCAGATTCATGGGGGACCCAATGCACCAGTTACAAATGCAACTGCCAAGCCATCTGAATCGTCAACTGCACAAAGGAGCACCAGACCTGTTCCAAAAGCTCCTACTTCTCAACCTCCCGCCATGAGTTCTGATCCAGCAGCTCCAACGACCCCTGCTAAGGGAGATGCATCAAAGGCATTCCCTTTCCAATTTGGATCTATTAGTCCTGGCTTTATGAACGGGATGGCAATCCCTGCTCGCACAAGCTCAGCTCCTCCTAATATAGACGAGCAGAAGCGTGATCAAGCTCGACATGATTCTTTTAGACCTGCGCCTTCAATTCCAACTCCTCCTGTTCCAAAGCAGCAGGCAGTGAAGAAGGATGCTAGTGTTGCTGACCAATCTAATGCTGGGGAGACTCATACTGGGATTCGAGCAAAAAAGGATATTCACATGTCACCTTTACCACCAGCAAGCCAGATGCAGAAGCCTTCTGTTATTCCTTTAACAGGGATTTCAATGCCAATGCCATATCACCAGTCACAGGCATCTATACACTATGGTGGTCCTAATCCGCAGATTCAATCTCAAGGTATGTCATCTGCACCTCTGCAGATGCCATTACCAATGCCTTTACCAATTGGAAGTGCTGCACAGGTGCAACAACAGGTTTTTGTTCCAAGCCTTCAACCTCATCCTATTCATCCTCAGGGCATCATGCATCAAGGCCAAAACATCGGTTTCAGTCCACAAATTGGCCCTCAGTTGCCCCATCAGTTAGGCAACATGGGTATTGGCATCAGCCCACAATATCCACCACAGCAAGGAGGAAAGTTTGCTGGTCCTCGTAAAACTACTCCTGTCAAAATAACTCATCCTGAGACACATGAAGAGTTGAGACTTGATAAAAGGGCAGATGCATATTCAGATGGTGGGTCATCTGGTGCAAGGCCTCATTCTGGCATGCCTTCTCAATCTCAGCCTGCCCAGCAATTTGCAGCATCTCATCCTATTAATTACTATCCACCCACTTCCTACAGTGCCAATTCTCTCTTTTATCCAACTTCTAGTTCTCTTCCATTAACAAGTAGCCAGATAACTCCTAACTCCCAGCCACCTAGATTTAATTATGCAGTGAGCCATGGTCTGCAAAATGTTAGTCATGTTAATTCATCATCTCATAGTTCCCTGCCTGTTAATAAGGCTGGCACTCTGATTCCTGGCAATGCTGAACCACCTAATACAGATTTTTCACGTGATGTGCATAATACAATCTCGTCAGCTCCACCAGGAGTAACTTCTGTGTCTATTAAACCAAGTGGTGGATCTGGTGTTGTGGACTTGTCATTTTCCAAATCCAGTACCCAAAAGACTGGATCTCCTAGTTCTTCATTAACATCTAGTGATGCTTTCTCTTCTGTACCACTAAAAGGGTCTGAAACAGCTGAAATCTCTTCACAACAGACTAAGTTCTCCAGTGATTCTTCCGTTTTGGGCTCGTTGCCAAATCTAACTGCTGCATCTGCTGCGAAGCCAACATCGGCTTCCCTGTTGCTTTCTAGAGAAGATTCTGTTTCAGTTGTGCCTAATAATGAAGGCAGAAAGAAGGAATCTCTTAGCAGGTCAAATTCTTTGAAGGATAATCAGAAGAAAATACAGAAGAAAGGGCAATTGCAGCATCATGTTGCTGTGCAATCTCCTGCTACAGCTAATGTTCCTTCCCAAGCTGTTGATAGTGGTATCTCTGATTGTGAAGTTTCTGAAACTGTAGGAACTGAAACAAACCATTCTGCAGAAATTACCAGTGAAGATCTCTCAGCTGCAGCTTCAGACTCATTATCAGCTACCTGTGAGAGCATACCTTATGCTGTTGAAATGAAAACTAATGGTTCTACACAAGTGTCTTCTTGTGCATCAGCTGAAGGACCTGTTACTAAAGTGGTGGATAATTTTAAAAATCATAACAATGAAGAGATGGATGAATTCTCACAAGAGGATAAACTGTTACAGAAGAATATTTTGGAAACGGGTGGTAAAACAGAAATTTTGTCTCTTCAAGGATGTAAAGATGGTGGTGACGGTCAAACAGAATTGGAACAACCTAAGCAAGGTTCTGTGAAGTTAAGCACTGAGGTTGTGACTGTGAGGACTGTGGATCAAGGGCAGGATGAGTCTACAAGTTGTAGTGCAGAATGTGACAGGACGGCTGATAATTTAGGCATGTCTATCCCTACCACATTGGATTCTAAAGATGTTTCTTTAAATAGAAACGATAGTGTAGTTAGTGATGAAGTTGTTTCTACAAATTCTGGCACATCAGATCAGCAGTCTGCTGATCTTTTAGAAACGTGTAAGGATAGTTCAGAGAATGCTGGAAGTGGTTCAGTGTCTCTTCCAGCATCAGGTGTCAAAGACAGACCAGTTTCAGAGCCTAGTAAGGTGAAAACTACATCAAAGGGGAAAAAGAAACGAAAAGAGATTCTTCAGAAGGCTGATGCTGCTGGGTCAACATCTGATCTTTATAATGCATACAAGGGACCTGAGGAAAAGAGAGAAACTTCCGTAAGTTTAGAGAAAACAGAACTTGACGGAAAAGAAAGTACTTCTACTTCTGGAAATTTAGAGCAGTTGCCTACTGATGCGGCTGAGCCAGATGCTGGAGCAAGTGAACAAAATAAGCAGAGTAAAGCTGAACTTGATGATTGGGAGGAGGCAGTTGACATGTCTACTCCAAAACTTGAAGTTTCAGATAAAACTGAACAGGATAGTGATGGAAGTGCAGTTACTGCCAAAAAGTATTCTCGAGATTTCCTTTTGAAATTTGCCGAGCAATGTACTGATCTTCCCGAAGGGCTTAAAATCACAGCAGACATAGCCGAGGCTTTCATGGGTACTAATGTTAGTCCTCATGTAAGTGAACGTGATTCACATTCATCTGGTGGAAGAACTATTGATAGGTCAGGTGGGATATCTCGAATGGACCGTCGTGGGAGTGGTGTTATTGAAGAAGACAAATGGAGTAAAGTTTCTAATGCATTTCATTCTAGTATGCGTTTGGATGGCATTGGAGGCAATGCAGGATTTCGACCTGGCCAAGGAGGCAATTTTGGTGTTTTAAGGAATCCACGCACACAAGCACCTCTTCAATATGTTGCTGGTATTCTTTCTGGTCCAATGCAATCCATGGTAAATCAGGGAGGAATGCAAAGAAATAGCCCTGATGGAGAAAGGTGGCAACGTGCTACTAGCTTTCAACAGAGGGGTTTAATCCCATCTCCTTCTCCTCAAACTCCATTACAGATGATGCACAAAGCTGAGAAGAAATATGAGGTGGGTAAAGTGACAGATGAAGAAGAGGCAAAGCAGAGGCAATTGAAGGGTATATTGAACAAGTTAACTCCTCAGAATTTTGAGAAGCTTTTTGAGCAGGTTAGAGCAGTTAATATTGACAATGTAGTCACTCTCAATGGTGTCATCTCGCAAATCTTTGAGAAGGCCTTGATGGAGCCTACCTTTTGTGAAATGTATGCCAATTTCTGTTTTCATCTAGCAGCTGCATTACCTGATCTCAGTCAAGACAATGAAAAGATAACTTTCAAGAGATTATTGTTAAACAAGTGTCAGGAAGAATTTGAGAGGGGTGAAAGAGAGCAAGAAGAAGCTAATAAGGCCGATGAGGGTGAGGTCAAGCTGTCTAATGAGGAAAGGGAAGAGAAACGGACCAAGGCAAGAAGACGTATGTTGGGTAATATCAGATTGATTGGAGAACTATATAAGAAGAAAATGTTGACAGAGAGGATTATGCATGAATGCATCAAGAAATTACTGGGTCAGTATCAGGATCCAGATGAAGAAGATATTGAAGCTTTGTGCAAGCTGATGAGTACTATTGGGGAGATGATTGACCACCCCAAAGCGAAGGAACATATGGATGCATATTTTGAAATGTTGAGATCCTTGTCAGTCAACATGAACTTATCTTCTAGGGTGAGGTTCATGTTGAAGGATGTCATTGATTTGAGGAAGAATAAATGGCAACAAAGAAGAAAAGTTGAAGGCCCAAAGAAGATTGAGGAGGTGCACAGAGATGCTTCTCAAGAGAGGATGGCCCAAGCTGGTAGGTTGGGTCGTGGTCCCGGCAACAATCCAACTAGAAGGACTCCTATGGATTTTGGTCCAAGAGGGTCATCCATGTTATCTCCTAATTCTCAGATGGGTGGACTGCGCGGATTTCCTACTCAAGTTCGTGGGTTTGGTTCTCAGGATGTTCGCATGGATGAAAGGCAAACTTATGAGGCCAGGACATTGTCAGTTCCCTTGCCTCAAAGACCTTCAGGTGACGAGTCAATAACCTTGGTACCCATGGGTGGTCTTGCTAGAGGCATGTCCATTAGAGGTCCACCTGCAGTTTCAAGTTCAACTGGTCTTAATGGCTATAATAATTTTCCAGAGCGCGCCTCATACAGCTCTAGGGAGGACCCTGCATCAAGATATACACCAGATAGATTTTCTGGTTCAACTGCTTACGATCAATCTAGTGTTCAAGATCGTAATATGAATTATGGCAGCAGGGACTTGAGAAATTCAAATAGGGTTCATGATAAACCAGTTGTAACTTCACCACCTGCCAGAATGCAAGGTACAACAGTCTCCCAGAATATTTCTCCAGAGCGACTGCAGGACATGTCCATGTTAGCAATCAAAGAGTACTATAGTGCTAGAGATTTGAACGAAGTTGTTGAATGTATCAAAGATCTGAACTCTCCAAGCTTTCATCCTTCCATGGTCTCTCTCTGGGTGACGGACTCGTTCGAGAGAAAGGACACTGAGAGAGATCTTTTGTCCCAGCTGCTTGTTAACCTTGTGAAATCTGAGAATGGACCCTTGGGTCAAGTCCAGCTCATCAAAGGGTTTGAATCTGTTCTAAGTACTTTGGAAGATGCGGTTAACGATGCCCCCAAAGCACCAGAGTTTCTTGGCCGTGTTTTTGCCAAAGCTATAACAGAGCATGTAGTCTCTTTGAATGAGATTGGGCGGTTAATACATGAGGGTGGAGAGGAACCTGGCAGCCTCTTAGAAGTTGGACTTGCAGCTGATGTTCTTGGAAGCACCTTGGAGGTAATAAAAATGGAGAAGGGTGATGCTGTTTTGAGTGAGATTTGTGCAAGCTCCAAGTTGCGGTTGGAGACCTTCCGGCCACCGGAACCTCTTACATCAAGGAAGTTAGAGAAATTTATTTAG 5517 0.4359 MSFNQSKSDKSDAVYRKSGRSASFNQQRGSSGGAYGKAGGGGGGAGPSPSLSSSRSFNKKSNNNAQGGQSRVNPAPLNSAESNSTYAARTVPNGSHVQPQIHGGPNAPVTNATAKPSESSTAQRSTRPVPKAPTSQPPAMSSDPAAPTTPAKGDASKAFPFQFGSISPGFMNGMAIPARTSSAPPNIDEQKRDQARHDSFRPAPSIPTPPVPKQQAVKKDASVADQSNAGETHTGIRAKKDIHMSPLPPASQMQKPSVIPLTGISMPMPYHQSQASIHYGGPNPQIQSQGMSSAPLQMPLPMPLPIGSAAQVQQQVFVPSLQPHPIHPQGIMHQGQNIGFSPQIGPQLPHQLGNMGIGISPQYPPQQGGKFAGPRKTTPVKITHPETHEELRLDKRADAYSDGGSSGARPHSGMPSQSQPAQQFAASHPINYYPPTSYSANSLFYPTSSSLPLTSSQITPNSQPPRFNYAVSHGLQNVSHVNSSSHSSLPVNKAGTLIPGNAEPPNTDFSRDVHNTISSAPPGVTSVSIKPSGGSGVVDLSFSKSSTQKTGSPSSSLTSSDAFSSVPLKGSETAEISSQQTKFSSDSSVLGSLPNLTAASAAKPTSASLLLSREDSVSVVPNNEGRKKESLSRSNSLKDNQKKIQKKGQLQHHVAVQSPATANVPSQAVDSGISDCEVSETVGTETNHSAEITSEDLSAAASDSLSATCESIPYAVEMKTNGSTQVSSCASAEGPVTKVVDNFKNHNNEEMDEFSQEDKLLQKNILETGGKTEILSLQGCKDGGDGQTELEQPKQGSVKLSTEVVTVRTVDQGQDESTSCSAECDRTADNLGMSIPTTLDSKDVSLNRNDSVVSDEVVSTNSGTSDQQSADLLETCKDSSENAGSGSVSLPASGVKDRPVSEPSKVKTTSKGKKKRKEILQKADAAGSTSDLYNAYKGPEEKRETSVSLEKTELDGKESTSTSGNLEQLPTDAAEPDAGASEQNKQSKAELDDWEEAVDMSTPKLEVSDKTEQDSDGSAVTAKKYSRDFLLKFAEQCTDLPEGLKITADIAEAFMGTNVSPHVSERDSHSSGGRTIDRSGGISRMDRRGSGVIEEDKWSKVSNAFHSSMRLDGIGGNAGFRPGQGGNFGVLRNPRTQAPLQYVAGILSGPMQSMVNQGGMQRNSPDGERWQRATSFQQRGLIPSPSPQTPLQMMHKAEKKYEVGKVTDEEEAKQRQLKGILNKLTPQNFEKLFEQVRAVNIDNVVTLNGVISQIFEKALMEPTFCEMYANFCFHLAAALPDLSQDNEKITFKRLLLNKCQEEFERGEREQEEANKADEGEVKLSNEEREEKRTKARRRMLGNIRLIGELYKKKMLTERIMHECIKKLLGQYQDPDEEDIEALCKLMSTIGEMIDHPKAKEHMDAYFEMLRSLSVNMNLSSRVRFMLKDVIDLRKNKWQQRRKVEGPKKIEEVHRDASQERMAQAGRLGRGPGNNPTRRTPMDFGPRGSSMLSPNSQMGGLRGFPTQVRGFGSQDVRMDERQTYEARTLSVPLPQRPSGDESITLVPMGGLARGMSIRGPPAVSSSTGLNGYNNFPERASYSSREDPASRYTPDRFSGSTAYDQSSVQDRNMNYGSRDLRNSNRVHDKPVVTSPPARMQGTTVSQNISPERLQDMSMLAIKEYYSARDLNEVVECIKDLNSPSFHPSMVSLWVTDSFERKDTERDLLSQLLVNLVKSENGPLGQVQLIKGFESVLSTLEDAVNDAPKAPEFLGRVFAKAITEHVVSLNEIGRLIHEGGEEPGSLLEVGLAADVLGSTLEVIKMEKGDAVLSEICASSKLRLETFRPPEPLTSRKLEKFI 1838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01154 1838 MobiDBLite consensus disorder prediction 381 399 - -
Cca07g01154 1838 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4G-LIKE 131 1828 - -
Cca07g01154 1838 Coils Coil 1296 1316 - -
Cca07g01154 1838 Pfam MA3 domain 1656 1763 IPR003891 -
Cca07g01154 1838 SUPERFAMILY ARM repeat 1208 1438 IPR016024 -
Cca07g01154 1838 MobiDBLite consensus disorder prediction 614 649 - -
Cca07g01154 1838 MobiDBLite consensus disorder prediction 828 847 - -
Cca07g01154 1838 MobiDBLite consensus disorder prediction 1 240 - -
Cca07g01154 1838 MobiDBLite consensus disorder prediction 854 889 - -
Cca07g01154 1838 SUPERFAMILY ARM repeat 1645 1835 IPR016024 -
Cca07g01154 1838 MobiDBLite consensus disorder prediction 986 1017 - -
Cca07g01154 1838 MobiDBLite consensus disorder prediction 854 1020 - -
Cca07g01154 1838 MobiDBLite consensus disorder prediction 410 425 - -
Cca07g01154 1838 MobiDBLite consensus disorder prediction 1443 1460 - -
Cca07g01154 1838 MobiDBLite consensus disorder prediction 1060 1089 - -
Cca07g01154 1838 Pfam MIF4G domain 1214 1436 IPR003890 GO:0003723|GO:0005515
Cca07g01154 1838 MobiDBLite consensus disorder prediction 47 130 - -
Cca07g01154 1838 MobiDBLite consensus disorder prediction 480 494 - -
Cca07g01154 1838 MobiDBLite consensus disorder prediction 1443 1479 - -
Cca07g01154 1838 MobiDBLite consensus disorder prediction 936 957 - -
Cca07g01154 1838 MobiDBLite consensus disorder prediction 18 32 - -
Cca07g01154 1838 MobiDBLite consensus disorder prediction 1592 1618 - -
Cca07g01154 1838 MobiDBLite consensus disorder prediction 508 565 - -
Cca07g01154 1838 MobiDBLite consensus disorder prediction 620 646 - -
Cca07g01154 1838 MobiDBLite consensus disorder prediction 1305 1334 - -
Cca07g01154 1838 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 131 1828 IPR045208 GO:0003743
Cca07g01154 1838 MobiDBLite consensus disorder prediction 1561 1640 - -
Cca07g01154 1838 ProSiteProfiles MI domain profile. 1650 1774 IPR003891 -
Cca07g01154 1838 SMART if4_15 1214 1436 IPR003890 GO:0003723|GO:0005515
Cca07g01154 1838 Gene3D - 1214 1449 - -
Cca07g01154 1838 MobiDBLite consensus disorder prediction 366 425 - -
Cca07g01154 1838 MobiDBLite consensus disorder prediction 1561 1579 - -
Cca07g01154 1838 Gene3D - 1642 1838 - -
Cca07g01154 1838 MobiDBLite consensus disorder prediction 480 565 - -
Cca07g01154 1838 SMART ma3_7 1651 1765 IPR003891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01154 Cca-Chr7 28334937 28344352 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01154 1 790 Eukaryotic Initiation Factors Gene Family AT3G60240 35.714 2.06e-100 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01154 K03260 - gmx:100796636 3004.16