Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01144 ATGGCTGTGCTTGGGATTGGAGAAATCCTTGTAGCGGTTCTTCTTTTCGTTGTAATCCGCTATTGGAGGCTCAATAGGCATACCCCAATTGTCAAGTGGCCCATTCTTGGGATGCTACCTTCTCTTCTTCTCAACGTTCCCACCATCTTTGATTATATCACTTCTCTTTCGAAACAAGAAAGAGGTTCTTTCATGTTTGAAGGACCTTGGTTTTTAAACATGAACATTTTTGTCACCAGCGACCCTATGAATGTGCAACACATCACAAGCACAAAGTTTGAGAACTTTGGGAAGGGTGATGATTTTAGAGACATTTTTGAGGTGCTGGGAGATGGGATTTTTAGGTCCGATTCCCAGCTATGGAAGTATAACAGAACTATACTTCATTCAGCTTTTAAACAGCCAAGTTTTCGGTTGTTCACTCACAAAACCATTGAGAAAAAGATTGAGAGTTGTCTGCTTCCAGTTCTTGATCATGCATGCAAAGCAGGAATGGAAGTGGACCTACAAGAACTTTTTCAAAGGTTAACCTTTGACAACATTTGCTCTGTGGTTCTAGGATTTGATCCTAATTGCCTTTCCATTGAATTCCCAGAAGTTGCAGGTGAGAAAGCCTTCACAGAAATAGAGAATGTCCTGCTTTACAGACACATCATGCCAAGATGTTTACGGAAGCTGCTGAAATGGCTTCAAGTTGGAATAGAGAAGAAGCACAAACAAAGCCAGGAAATCATTGACCAAATGTTGTATGAACAAATCACCACATCCAAATTCAAAATGCTAAGCCAAAGTAGAACCCAAGCAGATGACTCGCAATATAGCTTGCTAAATGTTCTTATGAATAATGAATCAGGAAAGGAGAAAGTAGATGACAAGTTTCTGAGAGACACAGCAATAAATCTCCTTGCCGCTGGGAGAGACACCATTAGTTCAGGTCTCACTTGGTTTTTCTGGCTGGTGGCAACACACCCATCTGTGGAAGCCAAGATTCTTGAAGAGATCCAAGAAAATTTGCCACAAATTAAAGGTAATTGGAAGGATTTAGGTGTGGAAGGGCTTGGCAAGTTGGTTTACCTCCATGCAGCAGTGAGTGAAGCCTTGAGGCTTTATCCTCCAGTGCCTTTGGAGCACAAGTGTGCATTAAAATCTGATGTGCTTCCAAGTGGTCATAGGATTGATGCAAAAACCATGATTATATACTCTCTATACTCAATGGGAAGGATGGAGGAAATATGGGGAAATGATTGCTTGAAATTTAGACCAGAGAGGTGGATTTCTAAGGGAGGAGGGATCATTCAAGTACCCTCTTATAAGTTCATCGCTTTCAATGCAGGACCTAGAAGTTGTTTGGGTAAGAACATAAGCTTCAATGAGATAAAGATGATTGCTGCTGCGGTATTATGGAATTTTCAGATCCACTTGGTGGAAGGTCACCCCATATCCCCAAGTATCTCCATTATCCTTCATATGAAACATGGCTTGAAGGTTATAGTGACAAAAAGAAGCATTGGAACATAA 1518 0.4097 MAVLGIGEILVAVLLFVVIRYWRLNRHTPIVKWPILGMLPSLLLNVPTIFDYITSLSKQERGSFMFEGPWFLNMNIFVTSDPMNVQHITSTKFENFGKGDDFRDIFEVLGDGIFRSDSQLWKYNRTILHSAFKQPSFRLFTHKTIEKKIESCLLPVLDHACKAGMEVDLQELFQRLTFDNICSVVLGFDPNCLSIEFPEVAGEKAFTEIENVLLYRHIMPRCLRKLLKWLQVGIEKKHKQSQEIIDQMLYEQITTSKFKMLSQSRTQADDSQYSLLNVLMNNESGKEKVDDKFLRDTAINLLAAGRDTISSGLTWFFWLVATHPSVEAKILEEIQENLPQIKGNWKDLGVEGLGKLVYLHAAVSEALRLYPPVPLEHKCALKSDVLPSGHRIDAKTMIIYSLYSMGRMEEIWGNDCLKFRPERWISKGGGIIQVPSYKFIAFNAGPRSCLGKNISFNEIKMIAAAVLWNFQIHLVEGHPISPSISIILHMKHGLKVIVTKRSIGT 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01144 505 PANTHER CYTOCHROME P450 2 502 - -
Cca07g01144 505 Pfam Cytochrome P450 48 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g01144 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 442 451 IPR017972 GO:0005506|GO:0016705
Cca07g01144 505 Gene3D Cytochrome P450 16 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g01144 505 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g01144 505 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g01144 505 PRINTS P450 superfamily signature 440 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g01144 505 PRINTS P450 superfamily signature 449 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g01144 505 PANTHER CYTOCHROME P450 FAMILY PROTEIN 2 502 - -
Cca07g01144 505 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g01144 505 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g01144 505 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g01144 505 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g01144 505 PRINTS E-class P450 group I signature 449 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g01144 505 SUPERFAMILY Cytochrome P450 32 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01144 Cca-Chr7 28087960 28089725 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01144 1 502 Cytochrome P450 AT2G23180 43.385 2.07e-158 458
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01144 - - gmx:100785815 763.451