Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01142 ATGACAAATAAAGGAAAAGAGCTTGTGAATGAAGGAATGAAGGAGTGCAAGATTGCTGGAGAAGAGAACCAAGAAACAGAGCACGAAGAGAAGACTCTCTTCCTCCTTTGTCTTCACCATGCGACATCGGTGGGCGCGAGTGCGAGGAGCCAGAATGCTGGCAGCGAGAAGAGGCAGGGTCACAGGCACAATCTTAGCCAGTGCGCTTCGGATCTTAGCGAGTCGTGTTCGACGCCGCGTGGTAACAGTGGCAGCAACACGCTACTCTACACGCACGTGATCGCGTTCACGCTGTACGAGTTAGAGACCATAACGAAGAGCTTCCGCGGCGACTACATCCTCGGCAAGGGAGGGTTCGGGACCGTTTACAAATGCTACATTAATGAGAACGTGAGAGTGGGACTCAAATCGCTATCTGTAGCGGTCAAAGTGTTGAACAAAGAGGGACTACAGGGACATTGCGAGTGGCTCATGGAGGTGAATTTTCTAGAATCTTTCAGGTCATTGGAAGTGAGGGTTGGGGTGGATCTACTAGTAGCCATGGACTTGATGGTTCTCCAACTAACTGTTGGTCAAACTTTTAACCTCAGGGCCTATTGTTTTTTAAAAAGATTCCAAGCTTAG 624 0.492 MTNKGKELVNEGMKECKIAGEENQETEHEEKTLFLLCLHHATSVGASARSQNAGSEKRQGHRHNLSQCASDLSESCSTPRGNSGSNTLLYTHVIAFTLYELETITKSFRGDYILGKGGFGTVYKCYINENVRVGLKSLSVAVKVLNKEGLQGHCEWLMEVNFLESFRSLEVRVGVDLLVAMDLMVLQLTVGQTFNLRAYCFLKRFQA 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01142 207 PANTHER OS01G0588500 PROTEIN-RELATED 66 167 - -
Cca07g01142 207 SUPERFAMILY Protein kinase-like (PK-like) 82 168 IPR011009 -
Cca07g01142 207 PANTHER - 66 167 - -
Cca07g01142 207 Gene3D Phosphorylase Kinase; domain 1 93 178 - -
Cca07g01142 207 ProSitePatterns Protein kinases ATP-binding region signature. 114 143 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01142 Cca-Chr7 28002932 28007390 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01142 96 163 Glycoside Hydrolase AT3G07070 42.647 4.23e-09 53.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Cca07g01142 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01142 - - gmx:102662348 225.713