Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01138 ATGTTGTCGACGGTGCTGGAAGTGATGCGCGCAACACACGAGGAGGTGGAACGGTTGGAGCAGCTGATAGTGAAGGAGCTCCAGAATGAACTGAACACCAACAAAGAGTGGTTGTATCAGAGTCATCGTGTGCGGAACATGATCGACACCATTTCCTTCACCACTGAAAAGCTTATTGAGATATATGAAGATAACAACAATGCGAGAAAGGACGAGATTGCTGCTCTGGGAGGCCAAACCGCCACTGGAATTAACGTTTTCAGTGCTTTTTATGATAGACTCAAGGAGATTCGAGAGTATCACAAGAAGCATCTAATTGCACGTCCATACCTAATCCTAACCACTAAGACAACATTTAAATTTTGA 366 0.4426 MLSTVLEVMRATHEEVERLEQLIVKELQNELNTNKEWLYQSHRVRNMIDTISFTTEKLIEIYEDNNNARKDEIAALGGQTATGINVFSAFYDRLKEIREYHKKHLIARPYLILTTKTTFKF 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01138 121 PANTHER BNAA03G01920D PROTEIN 1 104 - -
Cca07g01138 121 Coils Coil 9 29 - -
Cca07g01138 121 Pfam Splicing factor SF3a60 binding domain 81 104 IPR021966 -
Cca07g01138 121 PANTHER SPLICING FACTOR SF3A-RELATED 1 104 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01138 1 108 C2H2 Transcription Factor Family AT5G06160 65.741 2.33e-43 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01138 K12827 - ccaj:109794159 211.46