Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01121 ATGGGTGAAGAAGTGAAAACAATTGATCTAGAGTCGGCTCTAAAGAAGCAAAAGAGGGAAGAGGAATGGGCGTTGGCGAAGAAGCAAGAACTCGAAGTGGCGAAGAAGAAGAGAGCTAAGAGTCGTAACCTCATCCACAACAGAGCTAAGCAGTACGCGAAGGAGTACGATGAGCAAGAGAAGGATATGATTAGGTTGAAACGTGAGGCCAAGTTAAAAGGTGGATTTTATGTGAATCCAGATGCTAAGCTTTTATTCGCATTCGTGGTATTTATGCCATGCACCCCAAGACAAGGAAAATCTTGCAGCTGTTGCAATTGA 321 0.4393 MGEEVKTIDLESALKKQKREEEWALAKKQELEVAKKKRAKSRNLIHNRAKQYAKEYDEQEKDMIRLKREAKLKGGFYVNPDAKLLFAFVVFMPCTPRQGKSCSCCN 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01121 106 PANTHER 60S RIBOSOMAL PROTEIN L7 10 88 IPR039699 -
Cca07g01121 106 Coils Coil 49 69 - -
Cca07g01121 106 PANTHER 60S RIBOSOMAL PROTEIN L7 10 88 - -
Cca07g01121 106 Pfam Ribosomal L30 N-terminal domain 11 79 IPR012988 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01121 Cca-Chr7 27312721 27313041 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01121 4 90 Cytoplasmic Ribosomal Protein Gene Family AT3G13580 70.115 1.91e-35 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01121 K02937 - gmx:100813342 144.436