Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01104 ATGGAGCCCCGCATCGTGCACGAGATTCACGCCATGCACCGCCTCCAGCACCACCCTAACATCCTCAAAATCCACAAAGTCCTTGCCACCAAGACCAAGATCTACCTCATCGTGGACTTCGCCGGTGGCGGCGAGCTCTTCTCCAAGCTCTCCCGTCGCGGCCGCCTCCCAGAGTCCCTCGCGCCCCGCTACTTCACTCAGCTCGTCTCCGCGCTCCGCTTCTGCCACCGCCACGGTTATAAGTTGGTGATGAACGCTTTTGACATAATCTCCATGTCCTCGGGGTTGGACTTGCGAGGGCTGTTCGAAACGACGTCGGATAAGGGGAGGCGGGGGGAGAAACGGTTCACTTTCGATAAGAGTGTGGAGACTGTCGAGACGAAGGTGAAGGAGGTTGGCTTGAATTTGGGGTTTAGGGTTGAGGTTGGGAAGAATGGTGTGATTGGGTTGGGATGGGACACTGTCGTCCGATTTTCTTCCTACAATGAAATTCTAGGGGAGGGGTTCTTTGCTGACTTTGCTCAAGTTGCTGATGATGAGAGCCGCCAGTTCTCTTGGTGTGCACAGAGGCTAGCTGAGTTGGGTTTTAAATATGGTGATATGCCAGCCCACAATTTGCTATGGAGGGAATGTGAGAAATCATCAGACAATGTTGCTGCATGTTTGGCTGTGATCCCATTAGTCCAGGAGGCTAGAGGACTTGATGTTGGGCCACGCCTGGTGAAAAAATTAGTTGGCTTTGGAGATAATAGGACATCTAAGATTGTGGCTAGAATTGCTTGCTACTAA 789 0.5234 MEPRIVHEIHAMHRLQHHPNILKIHKVLATKTKIYLIVDFAGGGELFSKLSRRGRLPESLAPRYFTQLVSALRFCHRHGYKLVMNAFDIISMSSGLDLRGLFETTSDKGRRGEKRFTFDKSVETVETKVKEVGLNLGFRVEVGKNGVIGLGWDTVVRFSSYNEILGEGFFADFAQVADDESRQFSWCAQRLAELGFKYGDMPAHNLLWRECEKSSDNVAACLAVIPLVQEARGLDVGPRLVKKLVGFGDNRTSKIVARIACY 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01104 262 Pfam NAF domain 84 141 IPR004041 GO:0007165
Cca07g01104 262 SUPERFAMILY Protein kinase-like (PK-like) 3 80 IPR011009 -
Cca07g01104 262 Pfam Protein kinase domain 4 79 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g01104 262 ProSiteProfiles NAF domain profile. 79 103 IPR018451 GO:0007165
Cca07g01104 262 PANTHER SI:CH73-314G15.3 148 260 - -
Cca07g01104 262 Gene3D Phosphorylase Kinase; domain 1 1 45 - -
Cca07g01104 262 CDD Ferritin_like 167 260 - -
Cca07g01104 262 Gene3D Transferase(Phosphotransferase) domain 1 46 82 - -
Cca07g01104 262 ProSiteProfiles Protein kinase domain profile. 1 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g01104 262 PANTHER OS01G0214400 PROTEIN 148 260 - -
Cca07g01104 262 CDD CIPK_C 85 150 - -
Cca07g01104 262 Pfam Protein of unknown function (DUF455) 148 259 IPR007402 -
Cca07g01104 262 Gene3D Kinase associated domain 1, KA1 83 165 - -
Cca07g01104 262 SMART serkin_6 3 170 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01104 Cca-Chr7 26500259 26501747 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01104 1 79 Miscellaneous Gene Families AT3G23000 72.152 7.33e-34 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Cca07g01104 DUF455 5.7e-38 CL0044
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01104 - - ccaj:114915371 519.62