Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01095 ATGTTGGATTACGAATGGGTGAACCCATCAACGATAAGACTCGCCGCCGCAAACGACGGCGGCGCCGCCACAGACCTCGACCAAGCCCACCGGCAAATGTTCGACCACAACTACGCCATGCTACCTGAGCCCATTCTCCAAGGCTTCAACCCACCGCACCACCCCTTGTTCGACCCACGCGCCTTCTTAGGCGCGTCCACCTCTTCCTTTTCGCCACCACCACTTAACCAAATCCCGCCTCTTGCTTCCTCTCACTGtgggcttgggcttgggcctggacttgggcttCTGCTCATGCCCAAGTCCGACGACGCTGTCAACTTCAGTTCCGCCTctgggcttgaccctgctcctggtcctgggcttgggcTCAACCTCGGAGGCCGCACCTACTTTCCCTCTTGCCTCGACGACACCGTAGGTCTATTCTACCGTACATCCAAAGCAGCAGAGTCGATTCTTACGGTGTCGTCGAATTTTCCACGTTGTCAGGCAGAGGGTTGCAATGTGGACCTTTCCGCCGCGAGGCACTACCACCGCCGCCACAAGGTGTGCGAGTTCCACTCCAAGGCCGCCACCGTGGTCGCCGCCGGGTTGACTCAGCGATTCTGCCAGCAGTGCAGCAGATTTCATCTTCTTTCAGAATTTGACAATGGGAAACGGAGCTGCAGGAAGAGACTGGCAGATCACAATCGTCGCAGAAGAAAAACACAGCAACCAGATCAAGAAATCCACAAATCCCACCCTTCTTTGGACAATGCTGCAAGATCCTCGTCTGAATCTGGAGCACAATCTCCGTCTTCACTGAAGGTGGCAGTGTCACCACTCACCACCAGATTATTTCCAACAAAGACCAAACCAAACTAG 867 0.5052 MLDYEWVNPSTIRLAAANDGGAATDLDQAHRQMFDHNYAMLPEPILQGFNPPHHPLFDPRAFLGASTSSFSPPPLNQIPPLASSHCGLGLGPGLGLLLMPKSDDAVNFSSASGLDPAPGPGLGLNLGGRTYFPSCLDDTVGLFYRTSKAAESILTVSSNFPRCQAEGCNVDLSAARHYHRRHKVCEFHSKAATVVAAGLTQRFCQQCSRFHLLSEFDNGKRSCRKRLADHNRRRRKTQQPDQEIHKSHPSLDNAARSSSESGAQSPSSLKVAVSPLTTRLFPTKTKPN 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01095 288 MobiDBLite consensus disorder prediction 251 288 - -
Cca07g01095 288 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 121 273 IPR044817 GO:0003677
Cca07g01095 288 Gene3D - 158 224 IPR036893 GO:0003677|GO:0005634
Cca07g01095 288 MobiDBLite consensus disorder prediction 226 288 - -
Cca07g01095 288 MobiDBLite consensus disorder prediction 234 250 - -
Cca07g01095 288 ProSiteProfiles Zinc finger SBP-type profile. 160 237 IPR004333 GO:0003677
Cca07g01095 288 Pfam SBP domain 163 236 IPR004333 GO:0003677
Cca07g01095 288 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 8 121 273 - -
Cca07g01095 288 SUPERFAMILY SBT domain 161 240 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01095 Cca-Chr7 25687761 25690650 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01095 1 210 SBP-box Gene Family AT1G02065 38.340 3.44e-41 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Cca07g01095 SBP 7.8e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01095 - - gmx:100808178 340.887