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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Cca07g01085
ATGAGCCAGTGTGTTCCAAGCTGGGATGTCGACGACAACCCACCACCCCCAAGACTCTCTCTTCGCTCCAACTCCAATTCCACTGCCCCTGATGTTCCCATGTTAGACTACGAAGTTGCGGAACTGACATGGGAAAATGGACAACTTTCTATGCATGGGTTAGGGCTACCGCGTGTGCCTGTAAAACCCCCAACAAGCGCCGCGAATAAGTACACGTGGGAGAAGCCTCGCGCGAGTGGCACCTTGGAGTCCATAGTGAACCAAGCCACGAGCCTGCCGCAGCGCGGGAAGCCGTCGCTGAAcggtgacggcgtcggcgtctgcgggggcttcgTGGTGCCGTGGTTCGACCCCCACGCGCACGGCGGCGGAGGCGGCGCCACCGCGAACACGGTGGGGATGGACGCACTGGTGCCGTGCTCGAAGCGGGAGGCGCGGAAGCAGGGCGTGGAGTCGGTCCCAGGCGGCACGTGCATGGTGGGGTGCTCCACACGTGTGGGGTCTTGCTGCGGTAACCAGGGGGCGAAGGGGCACGAGATGAGTGGGAGGGATCAGAGCGTGAGTGGCAGTGCCACGTTTGGGAGGGATAGCAAGCACGTGACCCTTGACACGTGCGACAGGGAGTTCGGTGTGGCTTTCACTTCCACCTCTATTAACTCTCTCGATAACACCAGCTCCGCTAAGCACTGCACCAAGACCACGACCGTTGACGACCACGATTCCGTTTCCCACAGTAAACCAGTGGGTGAAGATGGGGATAAGGAGAAGAAAAAGAGAGCGAACGGAAAATCGTCGGTGTCCACTAAAAGGAGCAGGGCTGCGGCTATACACAACCAATCTGAAAGGAAAAGGAGGGATAAGATAAACCAAAGAATGAAGACATTGCAAAAGTTGGTCCCAAATTCCAGCAAGACTGACAAGGCTTCAATGTTGGATGAGGTGATAGAATATTTGAAGCAGTTGCAAGCACAAGTGCAGATGATGAATAGAATCAACATGTCATCGATGATGCTGCCATTGACCATGCAACAACAGCTTCAAATGTCGATGATGTCTCCAatgggcatgggattagggatgggaatggggatggggatgggaatgggcatggACATGAACTCCATGAACCGTGCTAACATCCCTGGCATCCCTCCGGTTCTCCACCCTTCTGCCTTCATGCCCATGGCGGCCTCCTGGGATGCCGCTGCCGTTGCCGTCGGCGGCAGTGACAGACTTCAAGGAACTCCGGCCACCGTGATGCCTGACCCTTTGTCCACATTTTTTGGGTGCCAATCACAGCCCATGAACATGGATGCCTACAGTAGACTTGCTGCAATGTATCAGCAGCTGCATCAACCTCCAGCTTCTGGTTCCAAGAACTGA
1383
0.5199
MSQCVPSWDVDDNPPPPRLSLRSNSNSTAPDVPMLDYEVAELTWENGQLSMHGLGLPRVPVKPPTSAANKYTWEKPRASGTLESIVNQATSLPQRGKPSLNGDGVGVCGGFVVPWFDPHAHGGGGGATANTVGMDALVPCSKREARKQGVESVPGGTCMVGCSTRVGSCCGNQGAKGHEMSGRDQSVSGSATFGRDSKHVTLDTCDREFGVAFTSTSINSLDNTSSAKHCTKTTTVDDHDSVSHSKPVGEDGDKEKKKRANGKSSVSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVQMMNRINMSSMMLPLTMQQQLQMSMMSPMGMGLGMGMGMGMGMGMDMNSMNRANIPGIPPVLHPSAFMPMAASWDAAAVAVGGSDRLQGTPATVMPDPLSTFFGCQSQPMNMDAYSRLAAMYQQLHQPPASGSKN
460
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Cca07g01085
460
CDD
bHLH_AtPIF_like
272
333
-
-
Cca07g01085
460
Coils
Coil
278
298
-
-
Cca07g01085
460
PANTHER
TRANSCRIPTION FACTOR PIF1-RELATED
1
460
IPR031066
-
Cca07g01085
460
SMART
finulus
278
327
IPR011598
GO:0046983
Cca07g01085
460
MobiDBLite
consensus disorder prediction
232
262
-
-
Cca07g01085
460
Gene3D
-
267
333
IPR036638
GO:0046983
Cca07g01085
460
ProSiteProfiles
Myc-type, basic helix-loop-helix (bHLH) domain profile.
272
321
IPR011598
GO:0046983
Cca07g01085
460
PANTHER
TRANSCRIPTION FACTOR UNE10
1
460
-
-
Cca07g01085
460
MobiDBLite
consensus disorder prediction
1
31
-
-
Cca07g01085
460
MobiDBLite
consensus disorder prediction
174
193
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Cca07g01085
Cca-Chr7
25217361
25223718
Dispersed/Transposed
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Cca07g01085
1
441
Basic Helix-Loop-Helix Transcription Factor Gene Family
AT4G00050
51.007
8.44e-103
310
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
bHLH
Cca07g01085
HLH
7e-14
No_clan
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Cca07g01085
-
-
gmx:100798775
709.138
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