Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01084 ATGTCATTTGCCTGCAAAAGCTCCTTAAGCTTAGTCTTGATGTGCTCTCATTCAACGTATGATTATCATAGTCCATACCACCATGAAAATAGGAAGGTACCTTTAGCGCCTCTGCAAACTTTCGCACGCACTCATCTCCACTGGAAGCACAGTACCTTTAGGGTGGCGGCGGTGGTGCTTCACCATCTGCCTTCCCCTCATCTCGTCAGAGTCTGTAGGGAGAAGACAAGCGGTCATGTATATGCAATGAAGAAGCTTAAAAAATCAGAGATGCTTCGTAGAGGCCAGGTTGAGCATGTTAAAGTTGAAAGGAATCTCCTTGTAGAGGTTGACAACAATTACATTGTCAAACTTTATTATTCTTTTCAGAATGATGAATATTTCTATCTTATTATGGAGTACCTACCGGGTGGGGATATGATGACTCTACTTATGACAAAGGATACCTTGACTAAAGATGAAGCCAGATTTTATGTAGGAGAAACAATTCTGGCCATCGAATCTATACATAAACACAATTATATACATAGGGATATCAAGCTAGACAACTTATTACTTGATAGATATGGACACTTGAAATTGTTAGATTTTGGACTTTGTAAACCATTAGATTGTAGTACACTTGAAGAAAAGGATTTTTCTGCTTATTCCACAGTTGGTACACCAGATTATATTGCTCCAGAAGTTCTTTTAAAGAAAGGTTATTATTCCACAGTTGGTACACCAGATTATATTGCTCCAGAAGTTCTTTTAAAGAAAGGTTATGCGATGTTATGTGATTAG 783 0.3819 MSFACKSSLSLVLMCSHSTYDYHSPYHHENRKVPLAPLQTFARTHLHWKHSTFRVAAVVLHHLPSPHLVRVCREKTSGHVYAMKKLKKSEMLRRGQVEHVKVERNLLVEVDNNYIVKLYYSFQNDEYFYLIMEYLPGGDMMTLLMTKDTLTKDEARFYVGETILAIESIHKHNYIHRDIKLDNLLLDRYGHLKLLDFGLCKPLDCSTLEEKDFSAYSTVGTPDYIAPEVLLKKGYYSTVGTPDYIAPEVLLKKGYAMLCD 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01084 260 Gene3D Transferase(Phosphotransferase) domain 1 139 238 - -
Cca07g01084 260 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 69 208 - -
Cca07g01084 260 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 215 235 - -
Cca07g01084 260 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 236 260 - -
Cca07g01084 260 PANTHER SERINE/THREONINE-PROTEIN KINASE 236 260 - -
Cca07g01084 260 ProSiteProfiles Protein kinase domain profile. 57 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g01084 260 Gene3D Phosphorylase Kinase; domain 1 69 138 - -
Cca07g01084 260 SMART serkin_6 69 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g01084 260 Pfam Protein kinase domain 69 237 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g01084 260 ProSitePatterns Serine/Threonine protein kinases active-site signature. 174 186 IPR008271 GO:0004672|GO:0006468
Cca07g01084 260 PANTHER SERINE/THREONINE-PROTEIN KINASE 69 208 - -
Cca07g01084 260 PANTHER SERINE/THREONINE-PROTEIN KINASE 215 235 - -
Cca07g01084 260 SUPERFAMILY Protein kinase-like (PK-like) 69 238 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01084 Cca-Chr7 25093780 25098483 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01084 69 235 AGC Kinase Gene Family AT3G23310 71.220 1.16e-95 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Cca07g01084 Pkinase 1.2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01084 K08790 - gmx:100820558 297.745