Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01077 ATGTGTGAGAGTGGCGTAGCGGAAGCGTGGTGGTCTAAGGTGACGAGAGGAGTAGAGGAAGTTGTGGACTCGAAATATTTATTTAGCATGATCAATGATCTTCCTACTGTTTTTGAAGTTGTGTCTGAGAGGAAACAAATAAAGGACAAGCCCACTGCAGATAGTGGAAGCAAATCTAAGGGTAGTACCAAGACATGGTTAGGTTGTGAGTCTGCATCCCAAAAGTTTGCAAGGAAAGGAAAGCTATCAATATCCTTATATCTTCTAAGATATTAG 276 0.413 MCESGVAEAWWSKVTRGVEEVVDSKYLFSMINDLPTVFEVVSERKQIKDKPTADSGSKSKGSTKTWLGCESASQKFARKGKLSISLYLLRY 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01077 91 PANTHER PHD FINGER PROTEIN ALFIN-LIKE 1-LIKE 23 66 - -
Cca07g01077 91 PANTHER CPG BINDING PROTEIN 23 66 IPR045104 GO:0006355|GO:0042393
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01077 Cca-Chr7 24697586 24698417 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01077 23 64 Alfin-like Transcription Factor Family AT3G11200 62.791 2.66e-11 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01077 - - gmx:100793126 68.1662