Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01072 ATGTCCAAGATTCGCGGATTCAACCTCAGGACGCGCCTCATCCGGGTCTCCAAATGGGTCTTAAGAAAgatccggatccggaactcgacccgacccggataccgTCGCCTGGGTTGGTCCTCTAAGTCACCCATGGCGAAGCTCCGGAGGTGGGGCCGCAAGTTGACGGCAGGTGCGAAGTCGATCTTGAAAGTGACAGCCGAATCGGGTTATGCCCAATTAGGGTCAGAACCGGATCCAAGTGTGCCGAAGGGACACCTGGCGGTGTACGTGGGGCAGAAGGATGGCGAGTTGCACCGTGTTATGGTGCCGGTGATATACTTCAACCACCCTTTGTTTGGGGAGTTGCTGAAGGAAAGAGAGGAGGAGTTTGGGTTCCACCACGAAGGTGGAATCACCATCCCGTGTCGGGTCACGGAGTTCGAACGGGTCAAGACCCGAATCGCTTCTGGATCTCGCCGGACCACTCGTCACAAAATAATTGCCTGGCGCTAA 495 0.5172 MSKIRGFNLRTRLIRVSKWVLRKIRIRNSTRPGYRRLGWSSKSPMAKLRRWGRKLTAGAKSILKVTAESGYAQLGSEPDPSVPKGHLAVYVGQKDGELHRVMVPVIYFNHPLFGELLKEREEEFGFHHEGGITIPCRVTEFERVKTRIASGSRRTTRHKIIAWR 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01072 164 PANTHER SMALL AUXIN-UP RNA-RELATED 1 154 - -
Cca07g01072 164 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 154 IPR003676 GO:0009733
Cca07g01072 164 Pfam Auxin responsive protein 61 145 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01072 Cca-Chr7 24380103 24381272 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01072 77 156 Calmodulin-binding Proteins AT3G43120 46.250 1.20e-18 76.3