Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01062 ATGTCCGACGACAAAGAGGGCTTCTCCTCAACATCTCCAGCAGCGCCGCTAACCCCGCCGCTGCCACACTGGAGCTCTAAGGCGGAGCCACCCTCCGCCGCCTCCGCCAGTCACGCCGGAGCCGGAGATTGCCTGGAATCCATGACCAACTCCACCTACGTCGGCCATGACTCTGACCTCTGCCGAGACGACTCCGCCGCGCTCGTCCTCAAATTCGTCGCCCTCGCCTCCATCCTCCTCGCCGGTATGGCCTCCATCCTTCTCCAAGTTCCAATCCTCTGCTTCGCGCTCCTCTCCCTTGGCGTGGTCCTCTCCCCGGCGAACCCTCTCTCCACGTGCTCCGAACTCACGCGCCTCCTCCACCTCAGCAAGTCCTCTATCGTCTTTGCAGCGGCCTCCGTTGAGGAGAAAGCGCGCGAGCTTGGACTCTGA 432 0.6343 MSDDKEGFSSTSPAAPLTPPLPHWSSKAEPPSAASASHAGAGDCLESMTNSTYVGHDSDLCRDDSAALVLKFVALASILLAGMASILLQVPILCFALLSLGVVLSPANPLSTCSELTRLLHLSKSSIVFAAASVEEKARELGL 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01062 143 MobiDBLite consensus disorder prediction 1 40 - -
Cca07g01062 143 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 86 141 - -
Cca07g01062 143 Gene3D - 88 141 - -
Cca07g01062 143 PANTHER 4-COUMARATE--COA LIGASE-LIKE 9 86 141 - -
Cca07g01062 143 SUPERFAMILY Acetyl-CoA synthetase-like 88 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01062 Cca-Chr7 23699528 23701445 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01062 27 137 Monolignol Biosynthesis Gene Families AT5G63380 33.871 2.26e-08 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01062 - K01904 ccaj:114915531 146.747