Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01055 ATGTTCGTTTCTTCTGCGTCACATGTTCCTCGTTGGCTTCAAGTCCTTCTATCGGAGAAGTTCTACAACGCGTGCATAATTCACGAAGAGGCGAAGAAGAACGAGAAAAACGTGTATTGCTTGGATTGTTGCATCAGCCTCTGCCCTCACTGTTTGGCCCCTCACTGCGACCATAGACTCTTGCAGATTAGAAGATATGTTTATCATGATGTTATAAGGTTGGATGACGCCGCTAAGTTAATTGACTGCACCTCTGTTCAATCCTACACAACGAACAGTGCAAAAGTGGTATTTTTAAACCAAAGGCCACAAACAAGGAACTTCAGAGGCTCCGGCAATTTCTGCAGCACCTGTGACAGAAGTCTGCAAGACCCATACCACTTCTGCTCCCTCTCTTGCAAGATCAATTATCTCATGAGAACAACAGGTTCTCTCTGCGGCTACCTATTCGAGTGCAACTACATGGCGTTGCCAGAGTCTGGGCTCGACGACGGTCTAATGACCCCTGACTCGGTTCTCGAGCCGGCCGGTTCGGCCCGGACCTCGTCCGGTTCAGGAGGGTACGGTGGGGTGGATTGCAGGACCACCCTGGCTTGCACCGCCACCACTGAGGTTGTCAGGAAGAAGAGGAGCGGCGGCTCCACTTTCCGGCCACCGTGCCGGCCGGCGTGTTCGCCGGTGTCCGAAATCTCGGCGGGTCTGATGAACCGGAGGAAAGGGAACCCCCAGAGGGCCCCACTCTATTGA 747 0.5301 MFVSSASHVPRWLQVLLSEKFYNACIIHEEAKKNEKNVYCLDCCISLCPHCLAPHCDHRLLQIRRYVYHDVIRLDDAAKLIDCTSVQSYTTNSAKVVFLNQRPQTRNFRGSGNFCSTCDRSLQDPYHFCSLSCKINYLMRTTGSLCGYLFECNYMALPESGLDDGLMTPDSVLEPAGSARTSSGSGGYGGVDCRTTLACTATTEVVRKKRSGGSTFRPPCRPACSPVSEISAGLMNRRKGNPQRAPLY 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01055 248 PANTHER - 10 248 - -
Cca07g01055 248 Pfam PLATZ transcription factor 64 135 IPR006734 -
Cca07g01055 248 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 10 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01055 Cca-Chr7 23287402 23289284 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Cca07g01055 PLATZ 2.6e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01055 - - gmx:100787153 486.878