Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01053 ATGATTGAGGCTTCAAGGAGCTTTACTGTAGAGGTTGCTACGCTAGAAGTCGTCGGCTCATTTGCCCCGATCGACTTGACAAGAAGCCTGTCGCCTCGAGCATCCTTGACCAAGTTGGTTACCGAAGGGGCAACCCATGTGATCTCGAATACTTTAGTGGTCGATGTCGAGGTTGGTGGAGAGACTGAGCCTCCCGTCGCGACGCCATTGAACTCGAGCTTGACGCTGGCTAGCCGATCACGATGcatctatcagagTTGCTATCTTGTTCTGAGACATTCCCTAATGGATCTGGAGTCTGTGATCTACAAAAACTCGATTAAGGATGAATCATGGAAGACAGTGTTAACATTGGCTTATCAGAGCCTGGGAGTTGTGTATGGAGATTTAAGCACATCGCCACTTTATGTTTACAAAAGCACTTTTGCTGAGGACATTCAGCACTCAGAGAGCAATGAAGAGATATATGGGGTGTTGTCTTTTGTGTTCTGGACACTCACACTGATTCCACTCCTCAAGTATGTGTTCATTGTGCTTAAAGCAGATGACAACGGAGAGGGAGGGACTTTTGCTTTGTACTCTCTGCTATGCAGGCATGCGCAGGTGGGGTTGTTGCCTAATGTTCAGCTTGCAGATGAGGAATTAACGGAGTACACCAAGGATGGAACAGTGCCAATTGATAAGAGGAATGTTGGGCAGGGATTGAAATCAGTGTTGGAGAAACACAAGGTTCTGCAGAGGGTGCTGCTGGTTCTGGCTTTGATTGGGACCTGCATGGTTATCGGGGATGGTGTGCTTACACCTGCTATTTCTGTTTTCTCTGCTGTGTCTGGCTTGGAGCTTTCCATGTCTAAAGAGCAGCACAAATATGTTGAAGTCCCAGTTGCTTGTGTAATACTGGTGTTTTTGTTTGCACTTCAACATTATGGGACTCATCGAGTGGGGTTCTTATTCGCACCTGTTGTGATGACCTGGCTGGTATGCATCAGTTGTATCGGCGTGTATAATATCTTACATTGGAACCCACATGTTTATGAGGCTCTCTCTCCGTACTACATGTTCAAATTTCTGAAGAAGACTCAAAGGGGAGGTTGGATGTCCTTAGGGGGTATTCTACTATGTATAACAGGTTCTGAGGCTATGTTTGCTGATCTAGGACACTTTTCACAGTTGTCAATTCAGATTGCTTTTACTTTTTTGGTATACCCTTCTTTAATCCTGGCATATATGGGACAAGCTGCATATCTATCCAAGCATCATACTATTGAAAGTGATTACCGAATTGGGTTCTACGTATCTGTACCTGAGAAAATTAGATGGCCTGTTCTTGCTATAGCCATACTTCAAGCTGTGGTTGGAAGTCAGGCTATCATCACAGGTACATTCTCAATAATCAAACAATGTTCTTCCATGGGATGCTTCCCGAAAGTGAGGATCATTCATACGTCATCGAAGGTACATGGCCAGATTTACATTCCCGAGATCAACTGGTGTTTGATGCTACTTTGCCTGGCCATTACTGTTGGATTCAGAGATACAAAACGCATGGGAAATGCATCAGGCTTGGCTGTCATAACTGTAATGCTCGTGACCACTTGCTTAATGTCTCTAGTCATAGTATTATGTTGGCACAAGAGTATTTTCCTAGCCATTTGCTTCATATTCTTCTTTGGCTCCATTGAAGCACTATACTTCTCTGCATCCCTCATCAAGTTCCTTGAAGGGGCTTGGGTTCCCATTGCCCTATCTTTCATCTTTCTTATTGTCATGTACGTGTGGCACTATGGCACACTTAAGAAGTATGAGTTTGATGTTCAAAACAAGGTTTCCATCAACTGGCTCCTTGGTTTAGGCCCCACTCTAGGAATTGTCAGGGTTAAGGGAATTGGCCTCATACACACTGAGCTTGTTTCTGGGATCCCCGCTATTTTCTCTCATTTTGTTACCAATCTCCCAGCTTTTCATCAAGTTGTGATTTTCCTTTGCGTTAAATCCGTGCCAGTGCCACATGTGAGGCCTACAGAAAGGTTCTTAGTTGGTAGAGTTGGCCCTAAGGAATACCGGCTCTATAGGTGCATAGCAAGGTATGGCTATCGTGACTTTCACAAGGACGACAATGAGTTTGAAAAAGATCTCATTTGCAGCATAGCAGAATTCATACGCTCGGACACTTCTGAAAACAACCTAGGATTCGAAAGTTATGAGGATGACACAAAGATGACAGTTGTTGGGACCTCAGCATCAAACTCGGAAGGCATAATGATGTGTGAAGATGATAATTCTCAAATGGAAGACACTCTAGAATTGAGGGTGGTTAAGTCTCCTGAAATAGTGAGGAAAAGAGTAAGGTTTGTTCTGCCAGAGAGTCCACAGATTGATTTGAGTGCAAGGGAGGAGTTGCAGGAGCTGATGCAAGCGAGGGAGGCAGGAATGACATTTATAATGGGTCACTCATATGTGAAAGCAAAAAGAGGATCAAGTTGGATAAAGAAAGTTGTAATCAATTATGGGTATGATTTCTTGAGGAGAAACTCTAGAGGACCAAATTATGCTCTAAGTATCCCTCATGCATCTATCCTAGAGGTGGGCATGGTTTATCATGTCTGA 2607 0.4373 MIEASRSFTVEVATLEVVGSFAPIDLTRSLSPRASLTKLVTEGATHVISNTLVVDVEVGGETEPPVATPLNSSLTLASRSRCIYQSCYLVLRHSLMDLESVIYKNSIKDESWKTVLTLAYQSLGVVYGDLSTSPLYVYKSTFAEDIQHSESNEEIYGVLSFVFWTLTLIPLLKYVFIVLKADDNGEGGTFALYSLLCRHAQVGLLPNVQLADEELTEYTKDGTVPIDKRNVGQGLKSVLEKHKVLQRVLLVLALIGTCMVIGDGVLTPAISVFSAVSGLELSMSKEQHKYVEVPVACVILVFLFALQHYGTHRVGFLFAPVVMTWLVCISCIGVYNILHWNPHVYEALSPYYMFKFLKKTQRGGWMSLGGILLCITGSEAMFADLGHFSQLSIQIAFTFLVYPSLILAYMGQAAYLSKHHTIESDYRIGFYVSVPEKIRWPVLAIAILQAVVGSQAIITGTFSIIKQCSSMGCFPKVRIIHTSSKVHGQIYIPEINWCLMLLCLAITVGFRDTKRMGNASGLAVITVMLVTTCLMSLVIVLCWHKSIFLAICFIFFFGSIEALYFSASLIKFLEGAWVPIALSFIFLIVMYVWHYGTLKKYEFDVQNKVSINWLLGLGPTLGIVRVKGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVIFLCVKSVPVPHVRPTERFLVGRVGPKEYRLYRCIARYGYRDFHKDDNEFEKDLICSIAEFIRSDTSENNLGFESYEDDTKMTVVGTSASNSEGIMMCEDDNSQMEDTLELRVVKSPEIVRKRVRFVLPESPQIDLSAREELQELMQAREAGMTFIMGHSYVKAKRGSSWIKKVVINYGYDFLRRNSRGPNYALSIPHASILEVGMVYHV 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01053 868 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 96 868 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cca07g01053 868 Pfam K+ potassium transporter 120 700 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cca07g01053 868 TIGRFAM kup: potassium uptake protein 118 868 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cca07g01053 868 PANTHER POTASSIUM TRANSPORTER 6 96 868 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01053 Cca-Chr7 23101777 23121257 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01053 96 866 Inorganic Solute Cotransporters AT5G14880 77.792 0.0 1235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01053 K03549 - gmx:100793387 1375.92