Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01048 ATGGAAAGAAATTCTATATGGGTAGCATTTGCCACATCCCTTGTGCTCCTAAACATGACCAATTGTGTGGAGTATGAGGTCAAGAAAACATTGATACAATTTCTGGCACAAGTCTCTGGTAATGATGGCCAACAGAACTCCACTTTGATTTGGAAACAAGACTCTGATCCCTGCAAGGACCACTGGCAAGGTGTGTATTGTGATCCTCAAAGCATGTCCATAAAGAGGTTGATACTTGATAGGTTCAATTTGTCTGGAACACTTGATGCTGCTATGCTTTGCAACTTCCAGCCCCTGGCTGCATCTCTCACTTTTCTTAGCCTTGATGGCAACAAAATTAGTGGGGTGATAGCATCTGAGATTGGAAATTGCAAACAACTCACTCGCCTACACCTAAGTGGAAACCATCTTTCTGGAAACCTTCCTAGTTCACTAGCCATGCTAAACAACTTGAAGAGACTAGACATTTCGAGCAACGAGTTTTCGGGTCCCCTGCCAAACTTGTCCAGAATCTCAGGGCTGAACATGTTCCTTGCACAAAATAATCACCTTAGCGGAGCCATACCCGCCTTTAATTTCTACAATTTTGACCTATTCAATGTCTCCTTTAACGATTTCAGTGGCCACATTCCAAACGTGCATGGCTATTTCTCTTCTGATAGCTTCCTTGGTAATCCTGAACTATGTGGAGATCCACTTCCAAAAAAATGTTCTGATCAGCCTATGCCTCTTAGTGCATCAGAAGAATCAAAGGGTCCTTCTAGAGAGCAGATTCTTATGTATTCAGGCTATGCTGCATTGGGTGTTGTCATTCTCCTTTTTGTAGTATTAAAGTTGTGTAGAAGAAAGAAGGGAGAGAATAAAATTGAAGCATTGAATGGGATGGTGGTGGTTGCTGATGGTGGTGTTGAAAAGAGCAGCAATGTTTCAAATCAATACAAAGATGGGGTAAGCAGGTCTGAGTTTTCGGCTACTTCAGAAAGTGGAACGGTTTCACAATCACTCGTAGTTCTTTCACGGCCTGCGACACATGAGGAAAGAATGTTTGAAGCATTGAAATTGGAGGACTTGTTGAGGGCCCCTGCCGAATTGATTGGAAGAGGAAAGAATGGAAGTCTTTATAAGGTAATGCTTGACAATGGGATAATGGTGGTTGTGAAAAGGATCAAGGATTGGACTATTTCAAGTTATGACTTCAAGCACAGAATGCAAATACTGAGTCAAGCAAAGCATCCTCATGTACTGTCACCCCTTGCTTTCTATTGCTCCAAACAAGAAAAGCTTTTGGTCTATGAATATCAGCAGAATGGAAGTTTATTCAAGCATCTACATGGTACTCCAAAAACCTTTGACTGGACCAGTAGACTTGGGATTGCAGCTATAATTGCCGATGCATTAGCTTTCATGCATCAAGAGCTAGGCCATCATGGTATTGGTCATGGTAACCTGAAATCCTCCAACATTTTGCTAAACAAGAATATGGAGCCATGTATAAGTGAATATGGTGTTATGGGCATGGATGATCAAGGAGGTTCACCTTTTGCAAGTCCTATTTATGCTGGTGCATCAGATATCTTAAAGGGAGATGTTTATGTCTTTGGTGTGATTCTTCTTGAACTTCTTACTGGCAAATTAGTGAAGAGCAATGGAATTGACTTGACTGATTGGGTTCAGTCAGTTGTGAGGGAAGAATGGACAGGTGAAGTCTTTGACAAGTGCCTACTGTCAGAGTATGCAAGTGAAGAGAGGATGGTCAATTTGCTTCAGGTGGCTATAAGATGTGTCAATCGTTCACCAGAGGCTAGGCCAAGCATGAACCAAGTTGCTCTTATGATTAACACTATCAAAGAGGATGAAGAAAAATCCTTGATTTATGAAGTGTGA 1884 0.4161 MERNSIWVAFATSLVLLNMTNCVEYEVKKTLIQFLAQVSGNDGQQNSTLIWKQDSDPCKDHWQGVYCDPQSMSIKRLILDRFNLSGTLDAAMLCNFQPLAASLTFLSLDGNKISGVIASEIGNCKQLTRLHLSGNHLSGNLPSSLAMLNNLKRLDISSNEFSGPLPNLSRISGLNMFLAQNNHLSGAIPAFNFYNFDLFNVSFNDFSGHIPNVHGYFSSDSFLGNPELCGDPLPKKCSDQPMPLSASEESKGPSREQILMYSGYAALGVVILLFVVLKLCRRKKGENKIEALNGMVVVADGGVEKSSNVSNQYKDGVSRSEFSATSESGTVSQSLVVLSRPATHEERMFEALKLEDLLRAPAELIGRGKNGSLYKVMLDNGIMVVVKRIKDWTISSYDFKHRMQILSQAKHPHVLSPLAFYCSKQEKLLVYEYQQNGSLFKHLHGTPKTFDWTSRLGIAAIIADALAFMHQELGHHGIGHGNLKSSNILLNKNMEPCISEYGVMGMDDQGGSPFASPIYAGASDILKGDVYVFGVILLELLTGKLVKSNGIDLTDWVQSVVREEWTGEVFDKCLLSEYASEERMVNLLQVAIRCVNRSPEARPSMNQVALMINTIKEDEEKSLIYEV 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01048 627 PANTHER OS05G0588300 PROTEIN 5 626 - -
Cca07g01048 627 PANTHER OS10G0387400 PROTEIN 5 626 - -
Cca07g01048 627 Gene3D Ribonuclease Inhibitor 22 237 IPR032675 -
Cca07g01048 627 Gene3D Transferase(Phosphotransferase) domain 1 435 626 - -
Cca07g01048 627 ProSitePatterns Protein kinases ATP-binding region signature. 365 387 IPR017441 GO:0005524
Cca07g01048 627 Gene3D Phosphorylase Kinase; domain 1 334 433 - -
Cca07g01048 627 Pfam Leucine rich repeat 102 160 IPR001611 GO:0005515
Cca07g01048 627 ProSiteProfiles Protein kinase domain profile. 359 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g01048 627 Pfam Protein kinase domain 363 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g01048 627 SUPERFAMILY Protein kinase-like (PK-like) 363 611 IPR011009 -
Cca07g01048 627 SUPERFAMILY L domain-like 49 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01048 Cca-Chr7 22962201 22964511 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01048 29 616 Receptor kinase-like Gene Family AT1G68400 34.215 2.23e-87 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Cca07g01048 Pkinase 3e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01048 - - gmx:100813796 1005.36