Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01046 aTGGCAGGGCGAGGGAGGTATTGTTACAAGGATGTGCTTCCATTCACGGCGTTGGTCGCAGTAGAGTGCACCAACGTTGGTGTCAACGTTCTCTTCAAAGCAGCAACTGAGAAGGGGTTGAGTTATTATGCCTTCATCGCTTATTCATTTGccttctccactctctttctccttttgcctctgcccttcgtcttccgatgGTCAAGAGGGCTTCCTCCACTCAACCTCTCTCTCATCTTCGCAATTTTTCTCCTTGGAGTAATTGGGCTTGTGGCCCAGCTTTGTGGATATCGAGGACTTCAATACACTTCGCCCACTCTCGCCTCTGCTCTCAGCAACCTTATACCGGCTTTCACCTTCGTATTAGCTATCATTTTCAGGATGGAGAAGGTAGTTTGGGGAAGCTCAGGTACTCGGGCCAAAATCATGGGTTCATTGGTATCCATATTAGGTGCACTCGTAGTTGTCCTCTATAAGGGTCCCATAGTCTTATCAACTTCATCTACACAACCATCACTTACCGTTGATTCTCCAATGGCCTCAACATCACAAATGAATTGGATTGTTGGTGGATCTCTACTAGCCATTGAGTTTCTTTTGGTCCCAATCTGGTATATTATTCAGACCAAGATAATGAAACAATACCCAGCAGAATTTATTGTGGTCTTCTTGTACAACCTGAGTGGGACTCTCATATCTGCACCAGTATGCTTACTATTAGAAGCGAATCTGAGTGCTTGGAAGATAAATCCTGATATTACATTAATCGCCATCATATATTCGGGGTTCTTTTGCACGGGCCTAAGTAGTTTGGTTCACACTTGGGGCCTTCATCTTAAAGGCCCAATGTATATATCAATCTTTAAGCCCTTGTCCATAGCCATTGCTGCCGCTTTAAGTGTCATATTCCTCGGTGATGCACTGTATTTTGGAACTGTTGTTGGAGCAGTGATACTCTCATTTGGGTTTTATGCTGTTGTATGGGGGAAAGCAAAAGAAGAAGAATTGAGTGAGGACTTAGACATACGTCCTCCATCGAGTAGTACGAATCCTTTGTTGCAGAGCTACAAAGTGAAAGATAACGAAGAGATCACGTATAATGATTCTTGA 1110 0.4162 MAGRGRYCYKDVLPFTALVAVECTNVGVNVLFKAATEKGLSYYAFIAYSFAFSTLFLLLPLPFVFRWSRGLPPLNLSLIFAIFLLGVIGLVAQLCGYRGLQYTSPTLASALSNLIPAFTFVLAIIFRMEKVVWGSSGTRAKIMGSLVSILGALVVVLYKGPIVLSTSSTQPSLTVDSPMASTSQMNWIVGGSLLAIEFLLVPIWYIIQTKIMKQYPAEFIVVFLYNLSGTLISAPVCLLLEANLSAWKINPDITLIAIIYSGFFCTGLSSLVHTWGLHLKGPMYISIFKPLSIAIAAALSVIFLGDALYFGTVVGAVILSFGFYAVVWGKAKEEELSEDLDIRPPSSSTNPLLQSYKVKDNEEITYNDS 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01046 369 Pfam EamA-like transporter family 203 327 IPR000620 GO:0016020|GO:0016021
Cca07g01046 369 Pfam EamA-like transporter family 27 156 IPR000620 GO:0016020|GO:0016021
Cca07g01046 369 PANTHER WAT1-RELATED PROTEIN 12 336 IPR030184 GO:0016021|GO:0022857
Cca07g01046 369 SUPERFAMILY Multidrug resistance efflux transporter EmrE 236 332 - -
Cca07g01046 369 PANTHER WAT1-RELATED PROTEIN 12 336 - -
Cca07g01046 369 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01046 Cca-Chr7 22804240 22818679 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01046 6 361 Nodulin-like Gene Family AT5G40240 54.596 1.84e-134 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01046 - - gmx:100805667 583.948