Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01038 ATGCTTCCCCTTCAATTCAGCACCCTCCCCCATCACGTGCCATCGCTGTTTCTGAGCAGCTCCAGCACGTGCTCCTCTTCCTCTCCCCTCCGACACAGCAACAGAAACAAGGCGTACCTTCTTCGCTCCAACGTTGGAGCCCTCAACCTTAGGGTCTCCGCAGCGTCTGGTGACTCCGCATTGAAGATGAACCTCAATGAGTACCTCGGTAATGCGGAGAGGTCCAGGATAGTTATGGTGGGCGACACTTTGAAGAAGGCTGGCGATTCGTCTCAGAACACTCTCGTTGAGATTAAAGACGTGGGAGATACACAGAAGGTGCTAAATGAGCAGACAAGTTCTTTTAGCTTGGTTCTTGAGAGGCCCACATCTCCTTTTCCCATTCAACTACTGCACAAGATGAATGATTTTGAAATACAGTTTAATAGAGGTCGAGTTCCCATTGCCACATGGAACAAGAACCTATTGGCATCAAATTTACAACCATCTAGTGAGAGCTGTGGGAATTCTGGATTTTTGATGTTCAACTCAAAGTTTCTTAAACCAAATGCAAGCAATTTATTGGGCAATCAAGATCATCATACCATCACCCATGGTGAGAGAAACTTCTTTACTGAACACACAACACAGCTTGCTTGTGTTTTTACTGAAGAAGTGTGTGGAGATGGAGACTGGGCTCATGGAAGTTTTCCACTTGAGGAATATATTCAGGCTCTGGATCGTTCCAAGGATGAGATGTACTATAATCACTCTCTTGGTATGCGTTATAGTAAGATTACAGAGCAAATATATGTGGGATCCTGTATACAAACAGAAGATGATGTAGAAACTTTGTCAAAAGTTGAGGGAATCACTGCTGTTCTGAACTTCCAAAGTGGAACTGAAGCTGAAAATTGGGGAATCAATGCAAAATCAATCAATGAATCTTGTCAAAGGAATAATATTCTCATGATCAACTATGCTATACGGGATGGAGATTCTTATGATATGAGGAAAAAACTTCCATTTTGTGTTGGGCTTTTATTACGGTTGCTAAGGAAGAATCTTCGTGTTTATGTTACTTGCACTTCTGGATTTGATCGGTCTCCTGCTTGTGTGATTGCATACCTACATTGGATGACAGATGTTTCCCTTCATGCAGCATATACCTGGGTCACTGGGATGCACATTTGCAGGCCTGACAGGCCAGCAATTGCATGGGCAACATGGGATCTTATAGCTATGGTTGAAAACGGGAAACATGATGGACCTCCTACACATGCTGTTACATTTGTGTGGAACGGTCATGAGGGTGAGGATGTAACTTTGGTAGGAGACTTTACTGGAAATTGGAAAGAACCACTCAAGGCAAAGCAACAAGGTGGATCAAGACATGAAGTAGAAGTTAAACTTCCACAAGGAAAGTACTACTACAAGTTCATTGTTAATGGACAATGGAAGCATTCAAATTCTTCACCATCAGAAAGGGATGAAAGGGGAAATGTTAACAATATAATTGTGATTGGCGAAACTGCCAGCGTCAGGCCTTCTGTTCAGCACCAGCAGAGAGATGCCAACGTCGTGAAGGTGATTGAAAGGCCTTTGAATGAGAAAGAGCGGTCTGGCAAAAGCAGCTCGTTGTATTGCCTTCTCTATCTGTCCTATCAGATTAGCTCCCAAATAGTTGCATGGAAATATCATAATGCACATAGCAAAGAGTTGTTAGCACACTTTTGGGCCTATGTTTTTTTACATCATTCTGTTATTCGTAATAAATTTTCCTAG 1764 0.4269 MLPLQFSTLPHHVPSLFLSSSSTCSSSSPLRHSNRNKAYLLRSNVGALNLRVSAASGDSALKMNLNEYLGNAERSRIVMVGDTLKKAGDSSQNTLVEIKDVGDTQKVLNEQTSSFSLVLERPTSPFPIQLLHKMNDFEIQFNRGRVPIATWNKNLLASNLQPSSESCGNSGFLMFNSKFLKPNASNLLGNQDHHTITHGERNFFTEHTTQLACVFTEEVCGDGDWAHGSFPLEEYIQALDRSKDEMYYNHSLGMRYSKITEQIYVGSCIQTEDDVETLSKVEGITAVLNFQSGTEAENWGINAKSINESCQRNNILMINYAIRDGDSYDMRKKLPFCVGLLLRLLRKNLRVYVTCTSGFDRSPACVIAYLHWMTDVSLHAAYTWVTGMHICRPDRPAIAWATWDLIAMVENGKHDGPPTHAVTFVWNGHEGEDVTLVGDFTGNWKEPLKAKQQGGSRHEVEVKLPQGKYYYKFIVNGQWKHSNSSPSERDERGNVNNIIVIGETASVRPSVQHQQRDANVVKVIERPLNEKERSGKSSSLYCLLYLSYQISSQIVAWKYHNAHSKELLAHFWAYVFLHHSVIRNKFS 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01038 587 CDD E_set_AMPKbeta_like_N 422 501 - -
Cca07g01038 587 ProSiteProfiles Dual specificity protein phosphatase domain profile. 255 411 IPR020422 GO:0006470|GO:0008138
Cca07g01038 587 PANTHER PHOSPHOGLUCAN PHOSPHATASE LSF1, CHLOROPLASTIC 70 533 - -
Cca07g01038 587 Pfam Glycogen recognition site of AMP-activated protein kinase 422 503 IPR032640 -
Cca07g01038 587 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 245 389 IPR029021 -
Cca07g01038 587 Gene3D Protein tyrosine phosphatase superfamily 248 514 IPR029021 -
Cca07g01038 587 Gene3D Immunoglobulins 409 505 IPR013783 -
Cca07g01038 587 CDD DSP_laforin-like 254 400 IPR045204 GO:0019203|GO:0046838
Cca07g01038 587 Pfam Dual specificity phosphatase, catalytic domain 264 385 IPR000340 GO:0008138|GO:0016311
Cca07g01038 587 PANTHER PHOSPHOGLUCAN PHOSPHATASE LSF1, CHLOROPLASTIC 70 533 IPR030066 GO:0005983
Cca07g01038 587 SUPERFAMILY E set domains 419 502 IPR014756 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01038 107 545 Protein tyrosine phosphatase (PTP) family AT3G01510 65.376 0.0 614
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01038 - - ccaj:109792221 1073.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g01038 07 22412774 22425369 Cca07g01038 07 22412774 22425369 ECH