Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01035 atgcttctccttggggtatcgcgATCGTATGATTCAGACAAAATTCCATCTAATGAGGATGAATTAGACCGGTGGTCCTTACCAGAACACAAACTTGTCTTGCTAGCTATTGTTGGAATAAAGGATCCTTGTCGCCCTGGAGTCAAGGGTGCTGTGAGAGTATGCACTGAAGCTGGCGTTAAGTTGATGTGGTTGAATTTTTTGTCTGGACTTGGAGGAGATGCTGCAGTTGCATTCCTTAAAGACTTGGATTATATGTCATTGACTTCTCTTTCATGGCGGCAAAGTGGAGATAGTGCAAAATCATTCCTTAGAGAAGAATGCATTTATAAGGAAAAATCAGAGAGGGATCAATTACGTCAAAAAGGAATGGAAAATGGTGGTACTCAGCTTTCCACAATGTTACTGCCATGGTTGGAGCTGGTGTTCTTGGTCTTCCCTATGCTGTGTCAGAGCTTGGACGATCTCGGACACAGCTATGGCCGTAATAACACGGATCTCGGACACAGCTATGGCCGTAACAACAAACCTACAAGGCCATCAATGGCTCAGCTAGGGAAGTGTTATTAG 570 0.4193 MLLLGVSRSYDSDKIPSNEDELDRWSLPEHKLVLLAIVGIKDPCRPGVKGAVRVCTEAGVKLMWLNFLSGLGGDAAVAFLKDLDYMSLTSLSWRQSGDSAKSFLREECIYKEKSERDQLRQKGMENGGTQLSTMLLPWLELVFLVFPMLCQSLDDLGHSYGRNNTDLGHSYGRNNKPTRPSMAQLGKCY 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01035 189 PANTHER CATION TRANSPORTING ATPASE 8 62 - -
Cca07g01035 189 Gene3D - 44 63 IPR023214 -
Cca07g01035 189 Gene3D - 17 43 IPR023299 GO:0000166
Cca07g01035 189 MobiDBLite consensus disorder prediction 168 189 - -
Cca07g01035 189 PANTHER CALCIUM-TRANSPORTING ATPASE 8 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01035 Cca-Chr7 22172421 22177875 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01035 8 62 Primary Pumps ATPases AT4G29900 63.636 3.02e-20 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01035 K01537 - ccaj:114916009 150.214