Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01030 ATGTTTGAGAGCTTACTAACCAAAGCTTACGGTGGAACCTCTTCTCCTGCACCAGAAATCTTTTCATGCACTGTTGGTCAGAAACCAAGTAAAGCTAAGTACTACTTAGATGATACTGAGGATGTGATGGGGTTGCTTCAAGCTCTTGTGGAGGAGTCTGCTCGAACATGGATCACTGAGATAGTGGAGCATCTTGAACATGGTAAATTACCGTCTAATCCAACAGCTGCTAAAAAGCTCCGAACGCAGGCTGCCAGATATAGTGTGGTTGGAGGAGAGCTATATAGAAGAGGATTCTCGGTTCCGTTGCTGAAATGCGTTGATAAAGAGCAAGCTAATTATATATTGAGAGAGATGCATGAAGGGATATGCGGTTTCcactcgggaggacgaactttagccactaagAACTGCGCAAACCCTCCAAAGAAGCTGAAGCCAGGAAACTATTGGTATGATAAAGTGTCTGGTCTTTGGGGGAAGGAGGGACAAAAGCCTTCAAAAATTATAAGTCCGCATCTGAATGTTGGAGGCCCCATCCAACCGGATGCTAGCAATGGAAACACTCAGGTTTTCATCAATGGTCGGGAAATAACAAAAGTGGAGCTTCGGATGTTGCAGGGTGTTTTGCTGAAAGGTGGAGATTCATTCATGGGTGCTAATGGGCTTCTAGTTCCAGGAGGTTTTGGTGAAAGAGGAGTGAAAGGGAAAATTCTTGCTGCTAAGTATGCTCGAGAAAATAGAGTTCCATTTCTGGGCATTTGCTTAGGGATGCAAATTGTTGAGTTTTCAAGATCTGTTCTGGGTCTTCATGATGCTAATAGCATAGAATTTGATCCAAAAACCAAAAACCTGTGTGTCATATTTATGCCTGAAGTATATTTCTGTCTACTCATTATGGTTATTGAATTTGTTAAGAGACATGTTAGTGCCTACACACCTCTCTTGGCCGGAAATTCAATATATGTTGATTTTCAATTTCTGAAGGTATTGATTCTGCCATAG 1005 0.407 MFESLLTKAYGGTSSPAPEIFSCTVGQKPSKAKYYLDDTEDVMGLLQALVEESARTWITEIVEHLEHGKLPSNPTAAKKLRTQAARYSVVGGELYRRGFSVPLLKCVDKEQANYILREMHEGICGFHSGGRTLATKNCANPPKKLKPGNYWYDKVSGLWGKEGQKPSKIISPHLNVGGPIQPDASNGNTQVFINGREITKVELRMLQGVLLKGGDSFMGANGLLVPGGFGERGVKGKILAAKYARENRVPFLGICLGMQIVEFSRSVLGLHDANSIEFDPKTKNLCVIFMPEVYFCLLIMVIEFVKRHVSAYTPLLAGNSIYVDFQFLKVLILP 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01030 334 Gene3D - 188 298 IPR029062 -
Cca07g01030 334 Gene3D - 1 61 IPR023214 -
Cca07g01030 334 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 178 334 - -
Cca07g01030 334 PANTHER EXTRA-LARGE GTP-BINDING PROTEIN 135 218 - -
Cca07g01030 334 PANTHER GTP-BINDING PROTEIN ALPHA SUBUNIT 135 218 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Cca07g01030 334 SUPERFAMILY Class I glutamine amidotransferase-like 218 295 IPR029062 -
Cca07g01030 334 Pfam Glutamine amidotransferase class-I 217 261 IPR017926 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01030 Cca-Chr7 21904742 21920489 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01030 1 49 Trehalose Biosynthesis Gene Families AT4G17770 57.143 2.14e-11 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01030 - - ccaj:109794450 179.104