Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01029 ATGGCAACTACGTTGTTCAGATGGAGTCCACAGTCAACTTGGGAAAAGAATCATATAAGTACCAATTTTTCTGGGAAAGAAATTGTTGAACCTGTGATGAGAATGTATACTGAGGCAACAAATGGCTCTTATATAGAGACCAAAGAGAGTGCCTTGGTATGGCACTACTATAATGTTTATCCTGATTCTGGATCTTGGCAAGCCAAGGAGCTATTGGATCATTTTGAAAATTTGTTTGCAAATGAACCCTTTTTTGTAAAGAAGGGAAAGCATATTATTGAAGTTAAGTCACAGAGGACATCCTGTCCCAAATGA 315 0.3778 MATTLFRWSPQSTWEKNHISTNFSGKEIVEPVMRMYTEATNGSYIETKESALVWHYYNVYPDSGSWQAKELLDHFENLFANEPFFVKKGKHIIEVKSQRTSCPK 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01029 104 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE (UDP-FORMING)-RELATED 5 99 - -
Cca07g01029 104 Pfam Trehalose-phosphatase 7 100 IPR003337 GO:0003824|GO:0005992
Cca07g01029 104 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 5 99 IPR001830 GO:0003824|GO:0005992
Cca07g01029 104 SUPERFAMILY HAD-like 7 99 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01029 Cca-Chr7 21904113 21904679 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01029 7 101 Trehalose Biosynthesis Gene Families AT1G60140 54.737 4.09e-32 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01029 K16055 - ccaj:109792883 201.445