Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01024 atgatggccacttgggaagacctggacacgacatcatctgaagatgatgaagaagcaaacatatgtcttatggcagacatagactcatcattggagtctgatgatgaaaagGAGGTCGCCAACGCCATCAATGACCTCCACATCGGCAACGCTGGCAAGAAACTATTATGCACCGACATCCAGTGCAAGAACCGCATCGACACACTCAAAAATAAGTACAAGCTCGAGAAGGCTAGGGTTTCCGATTCCGACGCCGGCTACCGCAGCCCCTGGCCTTTCTTCCCCCGCCTCGACACCCTCATCGGTGACACTTTCCCGCTCAAAAAAATCTCCTCGCCATCCGCCGCCACCAAACCGCCATCGTCGGCCTGGATGATTTCCTCCCACCCTATCGACCCCCGATCCGTCACGCAGAAACAGCCAGCACCGATTGTTACGCCGGCTGCCAAAGAGAACTTGCTCAAGCAATCAGAGAGGATGAAACTCTTCATGGAAACACAGGTTCAGCTTCAGAAACTCAAGCGCACCAAGCATTCTTCTGGAGCTGCATGTAGAGGAGGTCAAGTGGCATCGAGGAGGCAGCATAGGGTTGTAGATTCGACAAAGGCTGGCAATAAGGAGTTTAGGAAGTTTGGTTCGGGGTTTAGGCAAGTGCACAGGTTTGAGGTTGCCAAGGAAGGTTATAATTCTAGTGTAGAGTCTTTTGGCCACAGGGTGAATGCGGGAGGTCCAGAAAAAGGGATTCATGGGGCTGAAAAGAATGGAGAACTTAAACCAGGTGACAAGGTTGGGACCATGGATGACAAGAGTTTAGCATCCTTAGAGGAGACCAAAGgcttatgtgaagcagaaggcttatctgatcaggacctttgggctacttatgttttgggccttttgattaccctGCTTTATATTGGTGTTCCTGAAGTAATGGATATGCCAATAGTGTCTAATTGGACTTGA 966 0.412 MMATWEDLDTTSSEDDEEANICLMADIDSSLESDDEKEVANAINDLHIGNAGKKLLCTDIQCKNRIDTLKNKYKLEKARVSDSDAGYRSPWPFFPRLDTLIGDTFPLKKISSPSAATKPPSSAWMISSHPIDPRSVTQKQPAPIVTPAAKENLLKQSERMKLFMETQVQLQKLKRTKHSSGAACRGGQVASRRQHRVVDSTKAGNKEFRKFGSGFRQVHRFEVAKEGYNSSVESFGHRVNAGGPEKGIHGAEKNGELKPGDKVGTMDDKSLASLEETKGLCEAEGLSDQDLWATYVLGLLITLLYIGVPEVMDMPIVSNWT 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01024 321 Pfam Myb/SANT-like DNA-binding domain 38 100 IPR044822 -
Cca07g01024 321 PANTHER SEQUENCE-SPECIFIC DNA BINDING TRANSCRIPTION FACTOR 37 140 - -
Cca07g01024 321 PANTHER SEQUENCE-SPECIFIC DNA BINDING TRANSCRIPTION FACTOR 158 182 - -
Cca07g01024 321 MobiDBLite consensus disorder prediction 243 267 - -
Cca07g01024 321 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 37 140 IPR044823 -
Cca07g01024 321 MobiDBLite consensus disorder prediction 249 267 - -
Cca07g01024 321 MobiDBLite consensus disorder prediction 174 198 - -
Cca07g01024 321 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 158 182 IPR044823 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01024 Cca-Chr7 21654173 21658384 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01024 54 147 Trihelix Transcription Factor Family AT3G14180 42.708 4.81e-12 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01024 - - lang:109355153 125.176