Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca07g01012 | ATGTACTCATCATGGGTTGTCTTGATCTTCACCTCGTTTTTCTCAGTTGCAGTCTCGGATCCACGAATCACGGAAGCGGGACTGTACTGCGGCACAACGAAGGCGCCTCTGAAGGCGAACTACATCCCAAGCTTCATCAACGAAATGGAGAAGCTCTCGCAGAAGGTGGCGAGTAGCAACTGGGGCATGCACTCcatcaacgcatcaccatcaccatcaccatcatcatcatcatcatcatcatcttcatcatcttcatcgtcatcgtcatcaGTTATTCCCATATTTGGGTTCGCGCAATGCTTCGGCGACATGTCGCACACGGACTGTCTCCTCTGCTACGCGGCCAGCCGGACGAAGCTGCCGCGGTGCCTCCCATCGGTGGCGGCGCGCATCTACCTGGACGGCTGCTTCCTGCGCTACGACAACTACAACTTCTACGCGGAGGCCACCGACGGCGCGAGGGACGGCGTGAACTGCAGCGGCGGGGGAGTGGAGGAGGACGGGAGGGCGGGGCTTGGGGAGAGGGTGGGGAGGGTGGTTGAGAGAGTGGTGGGCGTGGCGGTGGGGGAAggtggtggtggtggtggtggtggtggGGTTGGGGGGGGGGAGGAGGTTGAGGGGGTTTATGCTTTGGCTCAGTGCTGGAAGAGTGTTgggagggaggggtgtagggagtgcttgaggaaagctgggagggaggTTAGAGGGTGCTTGCCCAAGAGGGAAGGGAGGGCCTTGAATGCTGGATGCTATTTGAGGTATTCAACTCACAAGTTCTATAATCAACAACCTCTTCTTCATGCAGATCCTCAAAATGGATCTTTAAGGAGAAGAGGAGTCATAGTAGCAGAAGTATTGGCAGCAGCTGCAGTTATAATGCTCGCTCTCTCTGCCTCTTATGCGGCCTTCACAAAATTGTCAAAGATAAAAAAAGAAAACAATAACCTTGGTCAGATTTCCTCTTCCATAAGCAAATCTAGCTTGAATTACAAGTATGAAACACTTGAGAAGGCCACGGATTATTTCAACTCTTCAAGAAAAATAGGCCAAGGTGGAGCTGGTTCAGTTTACAAAGGTGTTCTCCCAAATGGGAAAGTTGTTGCGGTTAAGAGGTTGATCTTCAATAACAGGCAATGGGTGGATGAGTTCTTCAATGAAGTGAATTTGATTAGCGGAATTGAACACAAGAACCTTGTTAAACTATTGGGTTGTAGTATTGAAGGCCCTGAGAGCCTCCTTGTGTATGAGTACTTACCCAAAAAGAGTTTAGACCAATTTATTTTCGAAAAGAACAGAACTCAGATTCTAAACTGGAAGCAGCGGTTTAATATCATTCTTGGAACAGCAGAAGGGCTTGCATATCTTCATGAAGGCACTAAAATAAGAATAATCCATAGAGACATCAAAAGCAGCAATATTCTTCTGGACGAGAATCTTATTCCTAAGATTGCAGATTTCGGCCTTGCCCGGTGTTTTGGTGCTGATAAGTCACATTTGAGCACTGGAATTGCAGGAACACTAGGTTACATGGCTCCCGAGTACCTAATTCGAGGACAACTTACAGACAAAGCTGATGTGTATAGTTTTGGGGTACTTGTTCTGGAGATTGTAAGTGGCAGGAGAAATAACGTCTTCAGAGAGGACTCTGGTTCACTTCTACAAACTGTTTGGAAACTTTACCGATTAAACACATTAACTGAAGCTATCGATCCTTGCTTGGGTGGTGATTTTCCTGAAACTGAAGCATCAAGGGTGTTTCAGATTGGATTGCTTTGCACACAAGCTTCAGCTACTCTAAGGCCATCCATGTCTCAAGTTGTTCACATGCTAAGTAATTCAAATGTGAATGTTCCAACACCAAATCAACCCCCATTTTTGAACACTGGAGTGCAAGACTCAGACAGCTCCATTAAGTCTTATAATAGCACTAACAGCTTCATATCCAATGCCTTGAAGAAGATTGGAGTGTCCTACAGCTACTCAGAGTCCTCTACTTCACGCAACTCAGACGGCCCATCAAGAAGTGAAGAATCAATTGTCCAAGTTTGA | 2055 | 0.4345 | MYSSWVVLIFTSFFSVAVSDPRITEAGLYCGTTKAPLKANYIPSFINEMEKLSQKVASSNWGMHSINASPSPSPSSSSSSSSSSSSSSSSSVIPIFGFAQCFGDMSHTDCLLCYAASRTKLPRCLPSVAARIYLDGCFLRYDNYNFYAEATDGARDGVNCSGGGVEEDGRAGLGERVGRVVERVVGVAVGEGGGGGGGGGVGGGEEVEGVYALAQCWKSVGREGCRECLRKAGREVRGCLPKREGRALNAGCYLRYSTHKFYNQQPLLHADPQNGSLRRRGVIVAEVLAAAAVIMLALSASYAAFTKLSKIKKENNNLGQISSSISKSSLNYKYETLEKATDYFNSSRKIGQGGAGSVYKGVLPNGKVVAVKRLIFNNRQWVDEFFNEVNLISGIEHKNLVKLLGCSIEGPESLLVYEYLPKKSLDQFIFEKNRTQILNWKQRFNIILGTAEGLAYLHEGTKIRIIHRDIKSSNILLDENLIPKIADFGLARCFGADKSHLSTGIAGTLGYMAPEYLIRGQLTDKADVYSFGVLVLEIVSGRRNNVFREDSGSLLQTVWKLYRLNTLTEAIDPCLGGDFPETEASRVFQIGLLCTQASATLRPSMSQVVHMLSNSNVNVPTPNQPPFLNTGVQDSDSSIKSYNSTNSFISNALKKIGVSYSYSESSTSRNSDGPSRSEESIVQV | 684 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca07g01012 | 684 | SMART | serkin_6 | 344 | 612 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cca07g01012 | 684 | Pfam | Protein kinase domain | 345 | 560 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cca07g01012 | 684 | ProSiteProfiles | Gnk2-homologous domain profile. | 154 | 261 | IPR002902 | - | |
Cca07g01012 | 684 | ProSiteProfiles | Gnk2-homologous domain profile. | 40 | 146 | IPR002902 | - | |
Cca07g01012 | 684 | Pfam | Salt stress response/antifungal | 205 | 258 | IPR002902 | - | |
Cca07g01012 | 684 | Pfam | Salt stress response/antifungal | 60 | 144 | IPR002902 | - | |
Cca07g01012 | 684 | SUPERFAMILY | Protein kinase-like (PK-like) | 327 | 645 | IPR011009 | - | |
Cca07g01012 | 684 | PANTHER | CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 | 10 | 677 | - | - | |
Cca07g01012 | 684 | MobiDBLite | consensus disorder prediction | 663 | 684 | - | - | |
Cca07g01012 | 684 | Gene3D | Phosphorylase Kinase; domain 1 | 303 | 419 | - | - | |
Cca07g01012 | 684 | PANTHER | CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 42 | 10 | 677 | - | - | |
Cca07g01012 | 684 | ProSiteProfiles | Protein kinase domain profile. | 344 | 628 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cca07g01012 | 684 | MobiDBLite | consensus disorder prediction | 68 | 88 | - | - | |
Cca07g01012 | 684 | Gene3D | Transferase(Phosphotransferase) domain 1 | 420 | 622 | - | - | |
Cca07g01012 | 684 | CDD | STKc_IRAK | 350 | 612 | - | - | |
Cca07g01012 | 684 | Gene3D | - | 28 | 146 | IPR038408 | - | |
Cca07g01012 | 684 | Gene3D | - | 187 | 261 | IPR038408 | - | |
Cca07g01012 | 684 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 465 | 477 | IPR008271 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca07g01012 | Cca-Chr7 | 21161312 | 21165801 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca07g01012 | 7 | 509 | Receptor kinase-like Gene Family | AT5G40380 | 54.617 | 0.0 | 551 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Cca07g01012 | Pkinase | 3.1e-44 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca07g01012 | - | - | ccaj:109803078 | 1197.57 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Cca07g01012 | 07 | 21161312 | 21165801 | Cca07g01012 | 07 | 21161312 | 21165801 | ECH |