Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00995 ATGGCAAACAGCAAAGAATCTCCATTCTCCGATGACTCCCCCAAAGATAACATAATTTTTACAGTGCATAAGTGTCAACCTGAGTTGGTGGCTCCTGCTATACCTACACCTCATGAACTTAAACTACTGTCTGACATAGATGATCAGGACTTCCTACGTTTCCCACCTTCACTCATCCAAATTTATCGTAATGAATCACCAACAGTTGAGAAAGATGCGGTTGAAATCATTCGAGAGGCACTCACTAAAACACTTGTTTTCTATTATCCATTTGCGGGTAGGCTTAGGGAGGTGTATGGTCGTAAATTGATGGTGGATTGTACTGGGGAAGGGGTCATATTCATTGAGGCCGATGCTGATGCAACACTTGATCAATTTAGTGGCTCTCTTCAACTTGCTCCATTCCAATACTCACAACAATTCCTGTATGATTCATGCTCGCAAGAAATTACTAATTGTCCTCTTCTAGTTATTCAGGTCACACGACTCAAGTGCAATGGCTTAATCTTAGGCATTCGGTGGAACCACAACATGAGCGATGCAACAGGTTTGTCACAGTTCATGAACGCGTGGGCCGAAATGGCTCGAGGTGCACGCAAGCCTTCGATTGCACCAGTGTGGCGCAGGGACCTTCTAATGGCAAGAGACCCACCACGCATTACATGCCACCATCGTGAATTCGAGCAAGTCCTAGGAACCAACGAAAGGACCATTTCATACGACAACATGCTTCATCGACCATTCTTCTTTGGACCCACCGAGGTAGCCGCCATTCGTCGCTTGGTTCCCCACCACCTTCGGAATTGCACCACTTTCGACGTGATCACGGCATGCTTATGGCGCTGTCGCACAAAAGCATTGCGAATAGATGCAGACGAGGATGTTAGCATGATGTGCATCGTCAACGCGCGTGCGAGGTTCAATCCTCGGATACCCGTTGGTTACTACGGCAACGTTTTTGCATACCCCGCAGCAGTCACCACCGCAAGGAAGCTTTGCGAAAATCCTTTTGGGCACGCCGTGGAGATGATAAAGAGAGTGAAAAAAGAGGTGACGGAGGAGTACATGCATTCCGTGGCAGATCTAATGGTGCTTAAAGGACGACGCATGTTCACAAGAACTATGAGGTCTTGTATCGTGTCGGATTTGACGAGTATTGGGCTTAGAGATGTGGATTTTGGATGGGGCAAGGCGGTGTCTAGTGGAATGGCTAAAGGTGGAACTGGTGACTTTCCTGGGACAACCCCTTTCTATGCGCATAAGAATGCCAAAGGAGAAGAAGGGGTAGTGGTACCACTTTGGTTGCCTGCTGAGGCTATGAGTAGGTTTGTGAAAGAGTTGGATGACATGGTTGGGAACCAAAACCAACCCCCAACAAGTGGTTCTTCTTTTATCAGGTCTACCTTCTAG 1410 0.473 MANSKESPFSDDSPKDNIIFTVHKCQPELVAPAIPTPHELKLLSDIDDQDFLRFPPSLIQIYRNESPTVEKDAVEIIREALTKTLVFYYPFAGRLREVYGRKLMVDCTGEGVIFIEADADATLDQFSGSLQLAPFQYSQQFLYDSCSQEITNCPLLVIQVTRLKCNGLILGIRWNHNMSDATGLSQFMNAWAEMARGARKPSIAPVWRRDLLMARDPPRITCHHREFEQVLGTNERTISYDNMLHRPFFFGPTEVAAIRRLVPHHLRNCTTFDVITACLWRCRTKALRIDADEDVSMMCIVNARARFNPRIPVGYYGNVFAYPAAVTTARKLCENPFGHAVEMIKRVKKEVTEEYMHSVADLMVLKGRRMFTRTMRSCIVSDLTSIGLRDVDFGWGKAVSSGMAKGGTGDFPGTTPFYAHKNAKGEEGVVVPLWLPAEAMSRFVKELDDMVGNQNQPPTSGSSFIRSTF 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00995 469 Gene3D - 229 447 IPR023213 -
Cca07g00995 469 PANTHER ALCOHOL ACYLTRANSFERASE 20 453 - -
Cca07g00995 469 Gene3D - 18 228 IPR023213 -
Cca07g00995 469 Pfam Transferase family 22 449 - -
Cca07g00995 469 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 20 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00995 Cca-Chr7 20508210 20510582 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00995 29 447 Monolignol Biosynthesis Gene Families AT5G48930 26.835 2.84e-43 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00995 K19861 - gmx:100792864 624.009