Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00968 ATGGACAAAGCAGTAGCTCATCCAGATTCAAGGAACAACGATCCGCGATCGCAAATCAATCAGAGTTCAATAAAAGAGCTTCCAAGGTCGGCTTCGGGATTCACCAAACGTCTCAGAAACTCGCCAAGCTCGCCAAGTAGGACTTCGATTTTTGACGACCCTACCATGGAAATCCAAGAGCTTACGGCGGTTATTAAGCAAGACATTACCGCATTGAACTCCGCGGTTGTGGATCTTCAGTTACTCTGCAACTCTCGGAATGAGAGTGGGAACGCTTCCACCGACACCACTAGCTTCTGA 300 0.4833 MDKAVAHPDSRNNDPRSQINQSSIKELPRSASGFTKRLRNSPSSPSRTSIFDDPTMEIQELTAVIKQDITALNSAVVDLQLLCNSRNESGNASTDTTSF 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00968 99 MobiDBLite consensus disorder prediction 11 53 - -
Cca07g00968 99 SUPERFAMILY t-snare proteins 23 95 IPR010989 GO:0016020|GO:0016192
Cca07g00968 99 PANTHER SYNTAXIN-32-LIKE 10 96 - -
Cca07g00968 99 PANTHER SYNTAXIN 10 96 IPR045242 -
Cca07g00968 99 MobiDBLite consensus disorder prediction 1 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00968 Cca-Chr7 18995431 18995817 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00968 19 95 SNARE and Associated Proteins AT3G24350 53.571 5.23e-18 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00968 K08490 - gmx:100777961 103.99