Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00959 ATGGTTGAGTTTTGGGTCATCATATTAAGTCTCTTCTCAGGACTTACCTTTTCTTGTCTTCTCATTTGGTATGTCGATAGAAACAAACAAGATTCCCCACACAATTTGCTCCATGGAAGCATGGGGTGGCCCTTTGCTGGGGAGACTCTTGGCTTCCTCAAGCCTCATACATCAAACTCCATGGGAAGCTTCTTACTAGAACATTGTTCTAGGTATGGCAAAGTTTTCAAGTCACATTTGTTTGGTTATCCCACCATAGTTTCATGTGACTTTGAGCTCAACACGTATGTTCTTCAGAATGAAGGGAAATTATTCCCCGTTGATTACCCCAAGGTGATGCATAACATCCTGGGGGATTACTCTTTGCTTATTGTCAAAGGAGACATTCACAGGAAGCTAAGAAACACCACTATCAATTTTGTCAGTGCAACAAAGTCCGAATCTAACTTCCTTCACTGGGTGGAAGTGCTTGCACTCTTGAGAATTAACTCATGGGATCCAATCTCTAAACAAGTTGCTTTCTATGGAGAAGCTAAAAAGTTTACGATCAATGTTATGGTGAAGCACCTACTGAACATTAATCCTGAGGAGCCACTAGCCTCCAAGATTTTACGAAACTTTGAGAACTACATCAAGGGTTTTATTTCATTGCCAATAAATTTTCCAGGGACAGCATATTCCAAGGCCTTGAAGGCTAGAATAAGACTCTCTGCCATAATCAAAGACATTATAACGGAGAGGCGTAAATGTAATAATGTGAAGGCTATGGAAGGAGGGGACCTCTTGAATGTGATTTTGTCAAAGCAGAACTTAAGTGATGAAGAGATGGTGAGTCTTGTGTTGGACCTCTTGTTTGGGGGTTATGAGACAACTGCAAAACTTCTGTCCTTGATTGCCTATTTCCTTGGTGGAGCCCCTAGAGCTTTAGAAACGTTAAGGGAAGAACACCAAGAGATAAGGAAAAGGAAAAAGGAGGGGGAACCACTTAACTGGGAAGATTATAACCAAATGCAGTTCACTCAAAATGTGATGTACGAAGCCATGCGATGTGGTAATGTAGTCAAATTTTTGCACAGGAAAGCTGTTGAAACTGTCAAATTCAAAGATTATGTGATACCCGCAGGGTGGAAGGTTCTTCCTGTCTTGTCTTCTGGACATTTGGATCCCACTCTTTTTGAAAATCCTTGGGAGTTCGACCCCTTTCGGTGGAATAACAAATCGACAAGCAAGAAAGCTGCACCATTTGGAGGGGGTCCACGACTATGTCCAGGGGCTGATCTAGCAAAAGTGGAAACATCATTCTTTCTTCATCATCTTGTCCTTAATTATAGGTGGAAAATCAAGTCAGATGATCCCCCACTTGCTTTCCCGTTTGTTGAATTCACCAGAGGGCTGCTTTTGGACCTTGAACCCATCGCA 1419 0.4207 MVEFWVIILSLFSGLTFSCLLIWYVDRNKQDSPHNLLHGSMGWPFAGETLGFLKPHTSNSMGSFLLEHCSRYGKVFKSHLFGYPTIVSCDFELNTYVLQNEGKLFPVDYPKVMHNILGDYSLLIVKGDIHRKLRNTTINFVSATKSESNFLHWVEVLALLRINSWDPISKQVAFYGEAKKFTINVMVKHLLNINPEEPLASKILRNFENYIKGFISLPINFPGTAYSKALKARIRLSAIIKDIITERRKCNNVKAMEGGDLLNVILSKQNLSDEEMVSLVLDLLFGGYETTAKLLSLIAYFLGGAPRALETLREEHQEIRKRKKEGEPLNWEDYNQMQFTQNVMYEAMRCGNVVKFLHRKAVETVKFKDYVIPAGWKVLPVLSSGHLDPTLFENPWEFDPFRWNNKSTSKKAAPFGGGPRLCPGADLAKVETSFFLHHLVLNYRWKIKSDDPPLAFPFVEFTRGLLLDLEPIA 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00959 473 Pfam Cytochrome P450 42 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g00959 473 PRINTS E-class P450 group I signature 422 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g00959 473 PRINTS E-class P450 group I signature 275 292 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g00959 473 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g00959 473 PRINTS E-class P450 group I signature 381 405 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g00959 473 PRINTS E-class P450 group I signature 412 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g00959 473 PANTHER CYTOCHROME P450 26 39 470 - -
Cca07g00959 473 SUPERFAMILY Cytochrome P450 32 454 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g00959 473 PANTHER CYTOCHROME P450, FAMILY 724, SUBFAMILY A, POLYPEPTIDE 1 39 470 - -
Cca07g00959 473 Gene3D Cytochrome P450 25 463 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g00959 473 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 415 424 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00959 Cca-Chr7 18598184 18606497 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00959 41 367 Cytochrome P450 AT5G14400 53.776 4.02e-124 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00959 K12639 - gmx:100791737 799.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00959 07 18598184 18606497 Cca07g00959 07 18598184 18606497 ECH