Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00949 ATGTGCAACAAGAACAGTTCCTCTTCTTCTTCCTCGGACATTCAAGCAGCCTCTGTCGTGAACATGAAGAGGACGCGAAAACAGAACAGAAAGTATTTCTCTTCGCCCTCGGGTTCGGGTTCTTCTTCCTCGTCTTCGTCTCTTAAGCCGCTTAAGCGCGGGAACAGGACGAAGACGAGGAAGCCCAAGTTCGTAAGCCTGCGTCTTCAGCTGTCCGAGTCTAATAAAAACGCggcccagcccaagcccaaggcccaggtccaggcccagggcgaaggcccGCAGCCGCAGCTGAATCTCTTCCCTCTGCATCCGGAGAGTCACGACATGCAGGAGGAGCAGAACGTGGCGCTGTTGTTCAGCTCGGACGGGGGCGGGAGCCTGAACGGGCTGCTGgaggacgagtcgacgacgacgacgacgTCTCCGTCGGAGGAGGAGGGGTCGCTGTCGGCGCTGACGTGTCCGGCGGAGGACGCGGGGAACTGGCTGGTgaggaaggcgatgcggcggagggagagcgaggaggggagtgaggagaggtgggtgtgttactcggaggtggtggaggagaagaaggaggtgatggaggaggTGACGAGTTATTGCGTCACGGGGAAAACGACGTCGTCTGGGTTGTTGTCCTTGAAGCTGGATCACGAAGGGATATTGAATGCTTGGTCTGATAAAGGCTCCCTCTATGTCGCCGGGGAAGAGGCCCCACAGACTGTGCCTGACTTTCTCACTGGTCTCGTCATTCATAATGCCTTCGTCCCCCATGTTGCATGGGAAGGTTGGGGGAGTGGTAGTGTTGGGAACGCATGGAGTGTTCCTGAAATTTGTGGGGCCAACAAGGTGAAGGAAGAAACGGGTTATTGGAAGCTGGGGCAGAGAGAGGCAAGTGTGCAGAGATACAAGGAAAAGAGGCAAAGCAGGCTCTTCTCAAAGAAGATCCGTTACGAAGTTCGCAAGCTCAATGCTGAGAAACGACCCAGGATGAAGGGACGGTTTGTGAAGAGGGAAGGAGAAGTGTAG 1035 0.4522 MCNKNSSSSSSSDIQAASVVNMKRTRKQNRKYFSSPSGSGSSSSSSSLKPLKRGNRTKTRKPKFVSLRLQLSESNKNAAQPKPKAQVQAQGEGPQPQLNLFPLHPESHDMQEEQNVALLFSSDGGGSLNGLLEDESTTTTTSPSEEEGSLSALTCPAEDAGNWLVRKAMRRRESEEGSEERWVCYSEVVEEKKEVMEEVTSYCVTGKTTSSGLLSLKLDHEGILNAWSDKGSLYVAGEEAPQTVPDFLTGLVIHNAFVPHVAWEGWGSGSVGNAWSVPEICGANKVKEETGYWKLGQREASVQRYKEKRQSRLFSKKIRYEVRKLNAEKRPRMKGRFVKREGEV 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00949 344 MobiDBLite consensus disorder prediction 131 149 - -
Cca07g00949 344 MobiDBLite consensus disorder prediction 127 151 - -
Cca07g00949 344 MobiDBLite consensus disorder prediction 68 95 - -
Cca07g00949 344 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 46 341 - -
Cca07g00949 344 PANTHER CCT MOTIF FAMILY PROTEIN 46 341 - -
Cca07g00949 344 MobiDBLite consensus disorder prediction 31 52 - -
Cca07g00949 344 MobiDBLite consensus disorder prediction 1 97 - -
Cca07g00949 344 ProSiteProfiles CCT domain profile. 298 340 IPR010402 GO:0005515
Cca07g00949 344 Pfam CCT motif 298 340 IPR010402 GO:0005515
Cca07g00949 344 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00949 Cca-Chr7 17887935 17896785 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00949 214 340 C2C2-CO-like Transcription Factor Family AT1G73870 45.669 3.73e-21 91.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Cca07g00949 CCT 1.2e-18 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00949 - - gmx:100811815 417.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00949 07 17887935 17896785 Cca07g00949 07 17887935 17896785 ECH