Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00944 ATGGAAATTGATCTGAACGATGCAGTGTCTGAGACTGATGAGAAGAGTGCGTCTTGCAATGGGGAGTGTGAGAAAGGTGCTGCTTGTGTTTGCTCTTTGTCCTCTCCAACTTGTTCATCCTCTGGCTCCTCCTCCGCACGTGTGTCTTCTTCTTATCTTAAGCTCTGGCACGCTTGTGCTAGCCCCCTCACTTCCCTCCCAAAGAAAGGGAATGTGGTGGTGTATTTCCCTCAAGGGCACTTAGAACAAGCTGCATCCTTCTCTCCCTTTTCACCAATGGAGATGCCTACCTATGATCTTCAGCCACATATCTTTTGTAGAGTTGTCAATATTCAGCTACTTGTGAGTACTCAATTTGAGGGTGGACTTGTGTTGAACCTGCTTAATTCATCTAAAGTTGTCGCACCCTTGTATCGGTTCGGTTAA 426 0.4648 MEIDLNDAVSETDEKSASCNGECEKGAACVCSLSSPTCSSSGSSSARVSSSYLKLWHACASPLTSLPKKGNVVVYFPQGHLEQAASFSPFSPMEMPTYDLQPHIFCRVVNIQLLVSTQFEGGLVLNLLNSSKVVAPLYRFG 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00944 141 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 21 116 IPR044835 GO:0003677|GO:0006355|GO:0009725
Cca07g00944 141 PANTHER AUXIN RESPONSE FACTOR 21 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00944 Cca-Chr7 17756488 17756913 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00944 49 116 B3 DNA Binding Superfamily AT5G60450 70.588 1.57e-27 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00944 - - gsj:114379877 179.874