Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00926 ATGAGAAATGTTACCAACCCCAGCTTGGAACGCTGTCAACTAAAAGAGGTTGTTGCTGCCAAGCCTGAAAAACTTGACTCTTTAGTGGCTGATAACGGAGAGAACTGGAGTGTGGGGCAGAGACAGTTGCTTTGTCTTGGGCGAGTTATACTAAAGAGAAGCCGGCTCTTGTTCATGGATGAGGCAACTGCTTCTGTTGATTCTCAAACGGATGGCGTGATTCAGAATATCATTAGAGAGGACTTTGCAGCATGTACCATCATCAGCATTGCTCACAGAATACCCACAGTTATGGACTGTGACAAAGTTTTAGTTGTAGATGCAGGTATGATATCATCTTTGCATTGCATTATTGCATTGCTCACTAAATGA 372 0.4328 MRNVTNPSLERCQLKEVVAAKPEKLDSLVADNGENWSVGQRQLLCLGRVILKRSRLLFMDEATASVDSQTDGVIQNIIREDFAACTIISIAHRIPTVMDCDKVLVVDAGMISSLHCIIALLTK 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00926 123 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 8 113 - -
Cca07g00926 123 Gene3D - 3 123 IPR027417 -
Cca07g00926 123 PANTHER ABC TRANSPORTER C FAMILY MEMBER 4 8 113 - -
Cca07g00926 123 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 113 IPR027417 -
Cca07g00926 123 Pfam ABC transporter 23 64 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00926 Cca-Chr7 16900473 16905576 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00926 22 114 Calmodulin-binding Proteins AT2G36910 32.258 1.49e-13 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00926 - K05666 gmx:100808752 193.741