Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00922 ATGGTGTTCACATTTCCAAGGCTTCTATCCATGAATCTCCAACCCTTTTGGGTGCTTCTTGCAATGTGCTTTTGTGCACTTGCAACCATTTCCTTTGCTTCTTCAGCAGCATCACAGAGCCAAGAAGCAAATGCTTTGTTGAAGTGGAAAGCCACCCTTGACAACCAAAGCCAAGCTTTTCTCTCATCATGGACTGGCAATAATCCTTGCAATTGGGTGGGAATTGCATGTGATGGGTCCAATTCTGTTTCCAACATAAGCCTTGCACATGTTGGATTAAGAGGTACGCTTCAAAGTCTCAATTTCTCATTACTTCCAAACATCCACAATCTAAATATGAGTTACAATACCTTGAAAGGAAAACTTCCTCCTCAAATTGGGGACTTGTCCAATCTCAACACTCTTGATTTGTCCACTAATAAACTCTCTGGCAACATTCCCAACACCTTTACTAATCTCTCCAAACTAATGTTTCTGAACCTTAGTTTCAATGGTATTTCCGGTCCTATTCCTAAGGATGTGGGAAAACTGCGTTCTCTTGTCACATTTGATATATTTACCAACAACCTCACTGGACCAATCCCAGATTCCATATGCACCTTGCCCAATTTGGAGTCTATTCACCTCTTTGAAAATCAACTCTCTGGGTCCATTCCTTTCAATATTGGAAACTTGTCAAAGCTCACTATGTTATCTTTGTCCACAAATAAACTCACTGGAAAAATCCCTCCCTCTGTTGGAAATTTAACAAATGCCAAGGTGATATGTTTTATTGGAAATGATCTTAGTGGCGAGATTCCAAAAGAATTGGACAAGCTTACTTCTTTGGAGTGTTTGCAGCTAGCTGATAACAATTTTGAAGGCCAACTACCCCAGAACATTTGCACAGGTGGAAAAATGAAATTCTTCACTGCTGGTAACAACAATTTCACAGGCCCAATTCCAAAGAGTTTGAAGAATTGCTATAGCCTTAAAAGACTCAGGCTTCAGCAGAACCATCTAACTGGAGATATAACAGATTTCTTTGATGTTCTTCCAAACTTGAACTATGCTGATTTGAGTGAAAATAATTTTCATGGTCAACTTTCACCTAAGTGGGGAAAGTTTCTTAGCCTCACAAGCTTCATGATCTCCAACAATAAGTTATCAGGTGTTATCCCACCAGAACTAAGTGGGGCGACCAACTTACAAGTACTACACCTTTCCTCAAACAATCTTACAGGAAACATTCCACGAGATTTAGGTAAATTGGTCTCCTTGTTTGATCTCTCAATCAACAAGAATAATCTCACTGGAAATGTTCCCATAGAAATAGCATCATTGCAGGAACTTAAATATTTGGAGCTTGGGTCAAATGATTTGACTGGCTTGATCCCAGCACAACTTGGAGATTTGTCCAATTTATTGATCATGGATCTGAGCCAGAATAAATTTGAGGGGCATATTCCTTTTGAGCTAAGTCAATTGCAATATCTTACAAGTCTTGATCTCAGTGGCAATCTTTTGAGTGGAACAATACCACCAGTTCTTGGAGGAATGAAAGGCTTAGAAACATTGAATCTCTCGCACAATAGTCTTTCAGGTCGTCTCTCTAGTTTTGATGGTATGATAAGTTTGACATCTGTTAATATATCATACAACCAACTTGAGGGTCCCCTTCCAAACATTCCAGCCTTTCAAAATGTTACCATTGAAGCATTGAGAAATAATAAAGGCTTGTGCGGCAATGTCACTGGCTTGGAGCCTTGCTCAAGTGGAAAATCTCCTAATCATAATATGACAAAGAAAGTCATAACAATAGTTTTACCACTTACTGTGGTCACACTCATATTGGCATTTTTTGCTTTAGGAGTCGTATATGGTTTATGCAAAACTTCAAAGGAAAAACAAGTCCAACCTAGACATTCACAAACTCCAAACATATTTGCAATATGGAGTTTTGGTGGCAAAATGGTATTTGAGAATATTATTGAAGCCACCGAACATTTTGATAGCAAATATCTCATTGGGGTTGGAGGGCAAGGATGTGTTTACAAAGCAACGTTGCCTACAGGTCAAGTTGTTGCCGTGAAGAAACTCCATTCTTTTCCAAATGGGGAAATGCTCAATTTGAAAGCTTTCACAAGTGAGATCCAAGCTTTGACAGAAATTAGACATCGTAATATCATGAAGTTATATGGATTTTGTTCACACTCACAAATCTCATTTTTAGTGTGTGAATTATTGGAGAAGGGCGATGTCAAGAAGATTTTGAAGGATGATGAACAAGCAATTGCATTTGATTGGACTAAAAGGGTGAATGTTGTTAAAGATGTTGCAAGTGCTTTATGCTATATGCATCACGATTGCACACCTCCAATTGTTCATCGTGATATATCAAGCAAGAATGTTCTTTTGGATTCAGACTATGTAGCTCATGTCTCAGACTTTGGAACAGCCAAGTTTCTTAATCCTAATTCATCCAACTGGACCTCATTTGTCGGGACCTTCGGATATGCTCCTCCAGAACTTGCATACACAATGGAGGTGAATGAAAAATGTGATGTGTATAGTTTTGGAGTGCTAGCATGGGAGATACTTTATGGAAGGCACCCTGGTGATGATATATCTAATTTTGTATCATCTTCGATGGGTGGCATGGCCTCAACACTTGATCACATGACATTGATGGATAAGTTGGACGAGCGTCTCCCTCATCCAACAAGCCCTATTGTTAAAGAAGTGATATCAATTGCAAAGGTAGCAATTTCTTGCTTGGCTGAAAACCCGCGATCTCGTCCTAGCATGGAGCAAGTTACCAAAGAGCTTGCAATGGCGAACTCATCTTCAATGCCACGTAAACACCCTGAGTTGAAGGACTAA 2862 0.3938 MVFTFPRLLSMNLQPFWVLLAMCFCALATISFASSAASQSQEANALLKWKATLDNQSQAFLSSWTGNNPCNWVGIACDGSNSVSNISLAHVGLRGTLQSLNFSLLPNIHNLNMSYNTLKGKLPPQIGDLSNLNTLDLSTNKLSGNIPNTFTNLSKLMFLNLSFNGISGPIPKDVGKLRSLVTFDIFTNNLTGPIPDSICTLPNLESIHLFENQLSGSIPFNIGNLSKLTMLSLSTNKLTGKIPPSVGNLTNAKVICFIGNDLSGEIPKELDKLTSLECLQLADNNFEGQLPQNICTGGKMKFFTAGNNNFTGPIPKSLKNCYSLKRLRLQQNHLTGDITDFFDVLPNLNYADLSENNFHGQLSPKWGKFLSLTSFMISNNKLSGVIPPELSGATNLQVLHLSSNNLTGNIPRDLGKLVSLFDLSINKNNLTGNVPIEIASLQELKYLELGSNDLTGLIPAQLGDLSNLLIMDLSQNKFEGHIPFELSQLQYLTSLDLSGNLLSGTIPPVLGGMKGLETLNLSHNSLSGRLSSFDGMISLTSVNISYNQLEGPLPNIPAFQNVTIEALRNNKGLCGNVTGLEPCSSGKSPNHNMTKKVITIVLPLTVVTLILAFFALGVVYGLCKTSKEKQVQPRHSQTPNIFAIWSFGGKMVFENIIEATEHFDSKYLIGVGGQGCVYKATLPTGQVVAVKKLHSFPNGEMLNLKAFTSEIQALTEIRHRNIMKLYGFCSHSQISFLVCELLEKGDVKKILKDDEQAIAFDWTKRVNVVKDVASALCYMHHDCTPPIVHRDISSKNVLLDSDYVAHVSDFGTAKFLNPNSSNWTSFVGTFGYAPPELAYTMEVNEKCDVYSFGVLAWEILYGRHPGDDISNFVSSSMGGMASTLDHMTLMDKLDERLPHPTSPIVKEVISIAKVAISCLAENPRSRPSMEQVTKELAMANSSSMPRKHPELKD 953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00922 953 ProSiteProfiles Protein kinase domain profile. 663 951 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g00922 953 ProSitePatterns Tyrosine protein kinases specific active-site signature. 787 799 IPR008266 GO:0004672|GO:0006468
Cca07g00922 953 Gene3D Ribonuclease Inhibitor 253 586 IPR032675 -
Cca07g00922 953 Pfam Protein kinase domain 666 934 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g00922 953 Pfam Leucine rich repeat N-terminal domain 41 78 IPR013210 -
Cca07g00922 953 Gene3D Ribonuclease Inhibitor 190 252 IPR032675 -
Cca07g00922 953 PRINTS Leucine-rich repeat signature 492 505 - -
Cca07g00922 953 PRINTS Leucine-rich repeat signature 513 526 - -
Cca07g00922 953 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 9 168 - -
Cca07g00922 953 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 159 942 - -
Cca07g00922 953 Gene3D Phosphorylase Kinase; domain 1 623 741 - -
Cca07g00922 953 SUPERFAMILY Protein kinase-like (PK-like) 640 936 IPR011009 -
Cca07g00922 953 Gene3D Ribonuclease Inhibitor 38 189 IPR032675 -
Cca07g00922 953 SUPERFAMILY L domain-like 77 387 - -
Cca07g00922 953 Pfam Leucine rich repeat 491 549 IPR001611 GO:0005515
Cca07g00922 953 Pfam Leucine rich repeat 371 430 IPR001611 GO:0005515
Cca07g00922 953 Gene3D Transferase(Phosphotransferase) domain 1 742 950 - -
Cca07g00922 953 SMART LRR_typ_2 513 535 IPR003591 -
Cca07g00922 953 SMART LRR_typ_2 394 417 IPR003591 -
Cca07g00922 953 SMART LRR_typ_2 441 464 IPR003591 -
Cca07g00922 953 SMART LRR_typ_2 225 249 IPR003591 -
Cca07g00922 953 SMART LRR_typ_2 273 297 IPR003591 -
Cca07g00922 953 SMART LRR_typ_2 129 152 IPR003591 -
Cca07g00922 953 SMART LRR_typ_2 465 489 IPR003591 -
Cca07g00922 953 SMART LRR_typ_2 153 177 IPR003591 -
Cca07g00922 953 SMART LRR_typ_2 201 224 IPR003591 -
Cca07g00922 953 SUPERFAMILY L domain-like 321 575 - -
Cca07g00922 953 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 159 942 - -
Cca07g00922 953 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 9 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00922 Cca-Chr7 16744367 16747935 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00922 4 835 Receptor kinase-like Gene Family AT4G08850 41.020 0.0 652
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Cca07g00922 Pkinase 8.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00922 - - gmx:100784831 1417.52