Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00902 ATGGTCGTGGGACCAACTTCGAAGAGGAGAAGGCTCACCAACGCTTGTTCCACCGACATGGATACTGAAACTGCCAAGGCCAAGCTTGCAGCTGTGAAGGAAAGATTTGGACGAGAGATCCACATTTTTGAAACATCAACTTTTGCTTCATCATCAAATGCTCCATTATCCAATGGAGAGGAGACCGATGACTTCTATGAGTTTACTGCTGAAGATTATTACAGACTTTTGGCTTCTAAGAAGGAAGATAAATTCTTGAAGACTCGAAAAATCCGAGAAGCAGAAGAGGCAGCTCGGAGGTCAAGAACAACCAAAGCTATAATTAGAGTACGCTTCCCCGATAATCACACGTTGGAGGCTACCTTCCACCCATCTGAAACACTCCAGAGTTTAGTTGATCTCCTCACGAAAGTGATTGCACAGCCAGAGCAGCCATTTTATATATATACTACTCCGCCTAAGAAGGTGATAAATGACTTGTCTCAGGATTTTTATGATGCTGGCTTTTGTCCCGGTGCCATTGTGTACTTTTCATACAATGTCCCAAAAGGTGGTAGCACTGTGGATGACCATAGTGGTCCTTACCTTCAAGAAGAGATCTTGTCTCTGAAGGATTTGAGTGTTGTTAATGATCAAGGCCAGCAATTTGAGGCTCAACAATTAGCACCGGAAGCTGCTGTGCCCACACAAATCGCCCCTCCTATCGAAGAACGCAAACCTACTGAGAAAAAGCTTGTTAAACCGAAATGGCTAAAAATGTGA 762 0.4383 MVVGPTSKRRRLTNACSTDMDTETAKAKLAAVKERFGREIHIFETSTFASSSNAPLSNGEETDDFYEFTAEDYYRLLASKKEDKFLKTRKIREAEEAARRSRTTKAIIRVRFPDNHTLEATFHPSETLQSLVDLLTKVIAQPEQPFYIYTTPPKKVINDLSQDFYDAGFCPGAIVYFSYNVPKGGSTVDDHSGPYLQEEILSLKDLSVVNDQGQQFEAQQLAPEAAVPTQIAPPIEERKPTEKKLVKPKWLKM 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00902 253 CDD UBX2_UBXN9 106 179 - -
Cca07g00902 253 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 1-RELATED 6 253 - -
Cca07g00902 253 ProSiteProfiles UBX domain profile. 101 177 IPR001012 GO:0005515
Cca07g00902 253 Pfam UBX domain 104 173 IPR001012 GO:0005515
Cca07g00902 253 Gene3D - 95 178 - -
Cca07g00902 253 SUPERFAMILY Ubiquitin-like 79 177 IPR029071 -
Cca07g00902 253 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 1 6 253 IPR044232 GO:0032984|GO:0051117
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00902 Cca-Chr7 15851186 15859157 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00902 2 126 C2H2 Transcription Factor Family AT2G01650 32.558 4.80e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00902 K15627 - gmx:100792947 388.652