Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00845 ATGCCGGAAGAAACGACGTCGATCGACTACGTGATGGAGGCCGCATCTGGGCCGCACTTTTCGGGCCTGAGACTGGACGGCCTGCTACCCTCCTCCCCCACTTCCGATTCAACCCTAACCTCCGATTCTCTCCCCAATCAACCCTTCGTCATAGGAGTCTCCGGCGGTACCGCCTCCGGGAAAACCACCGTCTGCGACATGATCATTCAGCAGCTTCACGATCatcaacattatctacctgtacatgtgattgtgtggtga 261 0.5019 MPEETTSIDYVMEAASGPHFSGLRLDGLLPSSPTSDSTLTSDSLPNQPFVIGVSGGTASGKTTVCDMIIQQLHDHQHYLPVHVIVW 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00845 86 PANTHER URIDINE KINASE 35 75 - -
Cca07g00845 86 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 44 77 IPR027417 -
Cca07g00845 86 Gene3D - 31 85 IPR027417 -
Cca07g00845 86 PANTHER URIDINE KINASE-LIKE PROTEIN 1, CHLOROPLASTIC 35 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00845 Cca-Chr7 14279216 14279559 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00845 1 76 PRT Gene Family AT3G27190 64.444 1.52e-31 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00845 K00876 - ccaj:114915048 162.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00845 07 14279216 14279559 Cca07g00845 07 14279216 14279559 ECH
Cca07g00845 07 14279216 14279559 Cca09g00553 09 14225430 14231005 ECH