Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00829 ATGGCGATGGAAGTGGAACTCAATCAGAATCAGCAATTAGGGTTTCCCTTCTGGAAACCGCTTCGTCGCAGGTTCCGACCAGACTCTCCTTTCTTCGCTCCCGGCAACCTCGAACGAGAACTTCTCGCCAAACAGGTTGCTTTGGAATTAACTGAAGAGAAGCAACAGCTTGAGAAATGGATGCAAGAGGAAGAAGGAAGGGAAGTCTTTTGTCCCATTGTTGGTTGTGGTGCACGCTTGACTTCGATGGAGGACTTTGAAGATCACTACAATGCAAGGCATACTGCATCCTGTTCTGTGTGTTCCAGAGTCTATCCTACGTCCCGTTTGCTCAGCATACATGTATCTGAAGTGCATGATTCTTTCTTTCAGGCAAAAGTTGCGCGTGGTTACGATATGTATGAATGCTTAGTGGAAAGTTGTGGTTTGAAATTCAAAAGCTACAACCGTAGGCAGCAGCATCTGGTTGACAAGCATAAATTCCCCACCTCATTTGAGTTTTTCAAGAAGGCTCGGCCTTCAAAGAAACATAGATTGAAGTCCCAACGCAAAAAAGCTGTTTGTAAGGAGGATGCATCAGGAATGATGGAAGTGGAAAATGCAGCCATGGATGACCTTGTTTCAGCAGTCTCTAAATTGAGCACTTCTGACTCCACTCCTTCGTCTATCAGCTTTGGCCGTCGCCCCAAAGGCTTGTCATTTGTCCCTCGAGCTGTTCAGCGTGGGGGTGGATCAAACTCGGCAGCATCCATGTCAAAGAGATAA 765 0.4654 MAMEVELNQNQQLGFPFWKPLRRRFRPDSPFFAPGNLERELLAKQVALELTEEKQQLEKWMQEEEGREVFCPIVGCGARLTSMEDFEDHYNARHTASCSVCSRVYPTSRLLSIHVSEVHDSFFQAKVARGYDMYECLVESCGLKFKSYNRRQQHLVDKHKFPTSFEFFKKARPSKKHRLKSQRKKAVCKEDASGMMEVENAAMDDLVSAVSKLSTSDSTPSSISFGRRPKGLSFVPRAVQRGGGSNSAASMSKR 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00829 254 ProSitePatterns Zinc finger C2H2 type domain signature. 136 159 IPR013087 -
Cca07g00829 254 MobiDBLite consensus disorder prediction 234 254 - -
Cca07g00829 254 ProSitePatterns Zinc finger C2H2 type domain signature. 71 94 IPR013087 -
Cca07g00829 254 SMART c2h2final6 69 94 IPR013087 -
Cca07g00829 254 SMART c2h2final6 96 119 IPR013087 -
Cca07g00829 254 SMART c2h2final6 134 159 IPR013087 -
Cca07g00829 254 Coils Coil 43 67 - -
Cca07g00829 254 PANTHER UNCHARACTERIZED 10 241 IPR039258 -
Cca07g00829 254 ProSitePatterns Zinc finger C2H2 type domain signature. 98 119 IPR013087 -
Cca07g00829 254 PANTHER ZINC FINGER PROTEIN 511 10 241 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00829 1 250 C2H2 Transcription Factor Family AT5G14140 63.077 8.92e-113 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Cca07g00829 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00829 - - gmx:100819557 465.692