Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00817 ATGGGTGTGATACCGGAGAAGCTGGTTTCCTTGTACAAGAGCCGGTGGCTGGTGTTCGTGGCCGCAATGTGGTTGCAGTCGTGGGCGGGTATTGGCTACTTGTTTGGGAGCATATCTCCGGTCATCAAGAGTTCCTTGAGCTACAACCAGAAGCAGCTTGCGGTGTTGGGTGTGGCCAAGGACCTCGGAGACAGCGTGGGGTTCCTTACTGGGGTGTTGTGTGAGCTTTTGCCTATATGGGGTTCTCTTCTTGttggtgctgctttgagccttgttggctatggtttggtttggttggttGTCACTGCTCGTGTTCCGGTTCTGCCTTTGTGGGCTATGTGTGTTCTTATCTTTGTGGGAACAAATGGTGAAACCTACTTCAACACAGTTTCTCTGGTGTCTTGTGTACAAAACTTCCCCAAAAGCCGGGGTCCTGTGGTTGGAATTCTGAAGGGCTTTGCTGGGTTGAGTGGTGCAATCTTGACACAAATATATGCATTGTTCCATACCCCTGATCATGCATCATTAATATTCATGGTTGCTGTTGGTCCAGCATTGGTAGTAATAGGTCTTATGTTCTTTGTTAGGCCTGTTGGGGGTCACAAACAAGTTCGGCCATCAGATGGAAAGTGCTTCACATTTGTCTATGGTGTGTGCCTCCTTTTGGCTGCTTATTTGTTGGGAATCATGGTTGTCCAAGACCTAGTTGACGTGAATGATACTGTAGTCAAAATATTCACAGCAATTCTCTTGTTGATAATCGTTGTCCCAATTTTTATTCCCATTTCATTGACTTTTGGCCCGGATCAAAAGCATCCAGAGGAAGAGGCACTTCTTCCAGAACCACAGAATAAAGAGCCAGGGAAGTCTCAACTGGATTCTGATGAAATAATACTGAGTGAGTTGGAAGATGAGAAGCCTAAGGAAGTGGACATGCTTCCTGCATCAGAGAGGCAGAGACGTATAGCACATTTGCAACAAAGACTGCTCCAAGCAGCTGCAGAAGGAGCAGTGAGGGTTAAGAGGAGGAGAGGACCACACAGAGGGGAAGATTTCACCTTGACACAAGCATTGATCAAAGCAGACTTTTGGCTTCTTTTCATTTCCATGATCATGGGTTCTGGATCCGGGTTGACCGTAATTGACAATCTGGGTCAGATAAGCCAGTCTCTAGGATATGACAATGCCCATATTTTTGTCTCCATGATCAGTATTTGGAACTTTCTTGGCCGTGTTGGAGGAGGTTACATATCTGAGCTTGTTGTGAGGGATCATGCATATCCAAGACCAGTTGCATTGGCTGTATTTCAACTGATAATGACTGTTGGGCATGTTTTCATTGGTATGGGATGGCCAGGGTCAATGTATGTTGGAACTTTACTGGTTGGAATTGGCTATGGGGCTCATTGGGCAATTGTTCCAGCTACTGCCTCTGAGTTGTTTGGTTTGAGAAACTTTGGTGCATTGTACAATTTCATTACTCTGGCAAACCCTGCAGGAACATTGGTCTTCTCTAGTCTCATTGCCAGCACCATCTACGATTCTGAAGCAGAGAAACAACATCCCCTTCATAATATGGGATCATTGATGGATGTTAGTGATTCTCTAAAGTGTTATGGTAGCGTATGCTTTTTCCTAACTTCCATGATCATGGCAGGACTGTGTGTTGTTGGAGCAGGCCTATGCATGGTTCTTGTGTTAAGAACAAGGATTGTTTATGCCAACCTATATGGAAAAACATCTTCTAGTAGGCTTCGATTATGA 1764 0.4399 MGVIPEKLVSLYKSRWLVFVAAMWLQSWAGIGYLFGSISPVIKSSLSYNQKQLAVLGVAKDLGDSVGFLTGVLCELLPIWGSLLVGAALSLVGYGLVWLVVTARVPVLPLWAMCVLIFVGTNGETYFNTVSLVSCVQNFPKSRGPVVGILKGFAGLSGAILTQIYALFHTPDHASLIFMVAVGPALVVIGLMFFVRPVGGHKQVRPSDGKCFTFVYGVCLLLAAYLLGIMVVQDLVDVNDTVVKIFTAILLLIIVVPIFIPISLTFGPDQKHPEEEALLPEPQNKEPGKSQLDSDEIILSELEDEKPKEVDMLPASERQRRIAHLQQRLLQAAAEGAVRVKRRRGPHRGEDFTLTQALIKADFWLLFISMIMGSGSGLTVIDNLGQISQSLGYDNAHIFVSMISIWNFLGRVGGGYISELVVRDHAYPRPVALAVFQLIMTVGHVFIGMGWPGSMYVGTLLVGIGYGAHWAIVPATASELFGLRNFGALYNFITLANPAGTLVFSSLIASTIYDSEAEKQHPLHNMGSLMDVSDSLKCYGSVCFFLTSMIMAGLCVVGAGLCMVLVLRTRIVYANLYGKTSSSRLRL 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00817 587 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 6 580 - -
Cca07g00817 587 SUPERFAMILY MFS general substrate transporter 214 570 IPR036259 -
Cca07g00817 587 CDD MFS_Mch1p_like 14 559 - -
Cca07g00817 587 Gene3D MFS general substrate transporter like domains 209 570 IPR036259 -
Cca07g00817 587 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4-LIKE 6 580 - -
Cca07g00817 587 SUPERFAMILY MFS general substrate transporter 7 200 IPR036259 -
Cca07g00817 587 Pfam Nodulin-like 15 262 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00817 Cca-Chr7 13750979 13755260 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00817 6 582 Nodulin-like Gene Family AT5G14120 70.172 0.0 825
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00817 - - gmx:100796700 1028.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00817 07 13750979 13755260 Cca07g00817 07 13750979 13755260 ECH