Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00806 ATGGAGAATTATTCCATGTTGTTTCCTTGTCCTGATTCTTCCAGCTACCCAACTGGGGTGGGAAGTTCTCAGCATGGTTTTAGTGGTCAAAGCTCCAATGCGTTTCTTGGTCTAAGGCCTAGTAATGATCAAAGTAGTGATGATCATGAGAAGAGAGGAGAAGATGCCATGTTATTGTCTCAGATCAGTGGTAGTGTTAGTGGTAGCATTAATGTGACCGATCAATTAGGTGGTTCTGGAAATGGTAAAAAGAAAGGAGAGAAAAAGGTTAGAAAGCCTAGATATGCTTTTCAAACGAGGAGCCAAGTTGATATTCTTGATGATGGTTATCGATGGAGGAAGTATGGCCAAAAAGCTGTTAAAAACAACAAGTTCCCAAGAAGCTACTACCGGTGCACGCATCAAGGGTGCAATGTGAAGAAACAAGTCCAACGCTTAACCAAAGACGAAGGGGTAGTGGTGACCACTTACGAGGGAGTGCACACACACCCTATTGAGAAAACAACAGACAACTTTGAACACATTTTGAGTCAGATGCAAATATACACTCCCTTTTAA 558 0.4194 MENYSMLFPCPDSSSYPTGVGSSQHGFSGQSSNAFLGLRPSNDQSSDDHEKRGEDAMLLSQISGSVSGSINVTDQLGGSGNGKKKGEKKVRKPRYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTKDEGVVVTTYEGVHTHPIEKTTDNFEHILSQMQIYTPF 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00806 185 SUPERFAMILY WRKY DNA-binding domain 98 165 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cca07g00806 185 SMART WRKY_cls 106 165 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cca07g00806 185 MobiDBLite consensus disorder prediction 69 92 - -
Cca07g00806 185 ProSiteProfiles WRKY domain profile. 101 166 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cca07g00806 185 Gene3D WRKY domain 91 165 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cca07g00806 185 MobiDBLite consensus disorder prediction 1 53 - -
Cca07g00806 185 Pfam WRKY DNA -binding domain 107 164 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cca07g00806 185 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 74 181 IPR044810 GO:0003700
Cca07g00806 185 MobiDBLite consensus disorder prediction 8 42 - -
Cca07g00806 185 PANTHER WRKY TRANSCRIPTION FACTOR 75-RELATED 74 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00806 Cca-Chr7 13325354 13327891 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00806 94 185 WRKY Transcription Factor Family AT5G13080 88.043 9.25e-59 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Cca07g00806 WRKY 1.7e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00806 - - ccaj:109792402 358.221
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00806 07 13325354 13327891 Cca07g00806 07 13325354 13327891 ECH