Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00805 ATGACGAAACCACCACCCATTGGGTTGCGCTTCCTCCAACCACCATCGCTTTCCCCTTTTCCCATATCGTGCGTTTCTCTCTCTCACTCTCCTCAATTGCATCCATTTTCTTCCCCACTCACACTCCACCATATTCGCCATTGCAGCTTCAATTTCCCAACGACTCAGCTTCCCAGAATCTACTGCAATTACTCCTCTTTTGAAGTTAGAGATGTTAGCTATCAACCACCAGGGACTCAGCTTAGGCTTCTAAATTCAGTTAGTTTTTCACTTCCAGAGAAAAGTTTAGGTCTAATTTTCGGACAGAGTGGTAGCGGAAAAACAACTCTCTTGCAGCTTCTTGCAGGAATAAGCAAACCAACCTCTGGATCTATTTGCATCCAGAAGTACGGCAATGATGGAAATCCTAGCGAACCTCCAGAGCCCTTGGTGCCGGAAAGGGTTGGTATTGTCTTCCAATTTCCTGAGAGGTATTTTGTGGCTGATAATGTGCTTGATGAAGTCACTTTTGGGTGGCCAAGGCAAAAGGGTAACCATTACCTGAGGGAGAATCTTGCTCTAGGGCTACAGAGGGCAATTAACTGGGTTGGGTTAAGTGGGATATCATTGGATAAAAATCCTCACTCCCTCAGTGGTGGTTACAAACGTCGTCTTGCCTTGGCAATACAATTAGTGCAAACCCCTGATCTATTGATATTGGATGAACCACTTGCTGGACTTGATTGGAAAGCACGTGCAGATGTTGTGAAGCTCCTGAAGTATCTGAAAAAGGAATTAACTGTGCTAGTTGTTAGCCATGATTTGAGAGAGTTTGCAAGTCTAGTTGACCGATCATGGAGAATGGAAATGGGCGGCAACCTTAGAGAGGAATTTCTGCAATTATGA 885 0.4475 MTKPPPIGLRFLQPPSLSPFPISCVSLSHSPQLHPFSSPLTLHHIRHCSFNFPTTQLPRIYCNYSSFEVRDVSYQPPGTQLRLLNSVSFSLPEKSLGLIFGQSGSGKTTLLQLLAGISKPTSGSICIQKYGNDGNPSEPPEPLVPERVGIVFQFPERYFVADNVLDEVTFGWPRQKGNHYLRENLALGLQRAINWVGLSGISLDKNPHSLSGGYKRRLALAIQLVQTPDLLILDEPLAGLDWKARADVVKLLKYLKKELTVLVVSHDLREFASLVDRSWRMEMGGNLREEFLQL 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00805 294 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 67 294 IPR003439 GO:0005524
Cca07g00805 294 PANTHER ABC TRANSPORTER I FAMILY MEMBER 11, CHLOROPLASTIC 51 290 - -
Cca07g00805 294 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 65 284 IPR027417 -
Cca07g00805 294 Pfam ABC transporter 84 237 IPR003439 GO:0005524
Cca07g00805 294 PANTHER HEAVY METAL TRANSPORTER 51 290 - -
Cca07g00805 294 Gene3D - 62 292 IPR027417 -
Cca07g00805 294 SMART AAA_5 93 285 IPR003593 -
Cca07g00805 294 CDD ABC_cobalt_CbiO_domain1 68 284 IPR015856 GO:0005524|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00805 Cca-Chr7 13195112 13206572 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00805 68 268 Calmodulin-binding Proteins AT2G36910 25.943 6.14e-11 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00805 - - gmx:100799365 464.536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00805 07 13195112 13206572 Cca07g00805 07 13195112 13206572 ECH