Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00802 ATGGATCCCAAGGGCTCAAAGcaggcacaggcacaggcacaggcacaggAGGTGGTACCAAACTTCCTGAGCcaacaacaacaacaaggtaacaacaacaTGGGAGAGAACAAGCCAACAGAGGTGAAGGATTTCCAGATAGTGGCTAGTGGTGGTGAGAAGGATGAGAGCAAGAAGCAGTTGGCACCAAAGAGGAGTTCCAACAAGGACAGGCACACAAAGGTTGAGGGGAGAGGGAGGAGGATAAGGATGCCTGCTTTGTGTGCAGCAAGAATCTTTCAGTTGACAAGAGAATTGGGTCACAAATCTGATGGGGAAACCATCCAGTGGCTCCTCCAGCAGGCTGAGCCATCCATCATAGCAGCCACTGGGACAGGCACAATCCCAGCCTCTGCTCTTGCTGCTGCTGGGAGCACTGTTTCACCACAAGCTGCCTCTCTCTCCTCACCCTTGCACCAAAAGATTGATGAATTGGGAGGAGGGGCCAGCAGTAGGACCAGTTGGCAAATGGTTGGGGGGAGTTTGGGGGGGAGACCCCATGTGGCCACCACAGGGCTATGGCCCCCCCATGTCACTGGATTTGGCTTCCAAACATCATCTAATGCCACCTTAGCCACTGAGAGTTCCAATTACCTCCAAAAGATTTCCTTCCCTGCTGCCTTTGACTTGCCCTCTGCCACCAACATGAGTTTCACCTCAATTCTTGGTGCTGGGGGTGCCCACCAGATGCCTGGCTTGGAGCTTGGTTTGTCCCAGGATGGCCATATTGGGGTCTTGAATCCTCAGGCCTTGAACCAGATTTATCACCAGATGGCTCAGCCTGGTAGAGTTcatcagcatcagcatcagcagcagcaacaAACTCCTGCTAAGGATGATTCACAAGGCTCAGGAGGACAGTAG 903 0.4795 MDPKGSKQAQAQAQAQEVVPNFLSQQQQQGNNNMGENKPTEVKDFQIVASGGEKDESKKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALAAAGSTVSPQAASLSSPLHQKIDELGGGASSRTSWQMVGGSLGGRPHVATTGLWPPHVTGFGFQTSSNATLATESSNYLQKISFPAAFDLPSATNMSFTSILGAGGAHQMPGLELGLSQDGHIGVLNPQALNQIYHQMAQPGRVHQHQHQQQQQTPAKDDSQGSGGQ 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00802 300 MobiDBLite consensus disorder prediction 273 300 - -
Cca07g00802 300 PANTHER TRANSCRIPTION FACTOR TCP20-LIKE 20 298 - -
Cca07g00802 300 MobiDBLite consensus disorder prediction 48 81 - -
Cca07g00802 300 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 20 298 IPR005333 GO:0003700
Cca07g00802 300 Pfam TCP family transcription factor 67 156 IPR017887 -
Cca07g00802 300 MobiDBLite consensus disorder prediction 276 300 - -
Cca07g00802 300 MobiDBLite consensus disorder prediction 1 81 - -
Cca07g00802 300 MobiDBLite consensus disorder prediction 7 39 - -
Cca07g00802 300 ProSiteProfiles TCP domain profile. 68 122 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00802 Cca-Chr7 13012762 13013664 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00802 1 298 TCP Transcription Factor Family AT3G27010 53.049 1.87e-82 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Cca07g00802 TCP 1.1e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00802 - - gmx:100800779 433.335
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00802 07 13012762 13013664 Cca07g00802 07 13012762 13013664 ECH