Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00793 ATGATCAATTCGTTGTGTGGAAGTTCAGTGTCCCTCAAGAGTGAGCACAACAACTCCAGAACCAAAACATCTTCTAATGACTCAGTTTTGCAATCCAAGAAAAATAATGCCACACAATCCTCTTCTGATCTAGACACTAGTTTAACCCCATTAAGCTTAAACCTTCCAGCACTCAAATTTGACTTAGATGGAGATGTGGAAGTTCAATCACCAGATAGTTCGATGTGGGAGTCCTTTTTCGCTGACCAACTAGATGCTGATTTCATGATCTCTTCCCCAGTGAGGAACGTTCCTTCACCACAAGCCTCTTCCTACAATTGCAACTACAACTACACTCAGGGAATGCAAGGCCAGAGCCTCTCAGGGTGTTCCCCACCTCGTTTTTCATCGTCCCAAATTGGAGCCTTCAATAGCAGCCACAAAGGGAAAGGACTTAGCCCCCTCCATAGGGTCTTTAACTCACCAAACAATCAATACATGCAACATGTTGAGAACCTTTCACTGCCTGCAATAGAAGAGTTCTTGGAGGACTATCAAGGGTATTCATCAAACAAAGTGTCTTCTGACATTGCAAGTTCATCTGAATGCTTTGATTTGTCGTCTCAAATTCCATCCATGTTGGATGGCTTGACAATGCCAAATTCTTCAAGGTACCATGAAGATGAAACCTTAGTGCACGGTGGTGTTGCTGGCTCTCGCTCTTCTCAAATTTCCCAAGAGAGCGACATGTATCACCAGATGGGGTCCATGGCTAGTGCCTCCTTGTCACAAGCTCTACAACAAGAACGCTACCACGAGAAACAACAAAAACAGCAGCAAGAGAATCTAATGCTGCCTATTCCAATAGGAATCGAACAGGAACAAGACAGCGGGCTTCAACTGGTGCACCTGCTACTAGCATGCGCTGAGGCAGTGGCAAAAGAGGAATACATGGTAGCGAGAAGGTACCTGCACCACCTGAACCGAGTAGTGACCCCTCTCGGTGACTCCATGCAACGGGTGGCAGCGTGCTTCACCGACTCGTTAAGCGTGAGACTGAACACCACCCTCACTCCAAAACCCTCAAAACCCACTCCACCCTCGCCCTCAAACTCTCTCGAAGTCCTCAAAATCTACCAAATCGTCTACCAAGCTTGCCCCTATGTCAAGTTCGCCCATTTCACCGCCAACCAAGCCATCTTCGAAGCCTTTGAGACCGAAGACCGCGTCCATGTCATCGACCTCGACATCCTCCAAGGGTACCAATGGCCAGCCTTCATGCAAGCCCTCGCCGCCCGTCCCGGTGGCGCCCCGTTCCTCCGCATCACCGGTGTGGGCCCAACCCTAGACGGTGTCCGTGAAACCGGGCGGTGCCTGACGGAGCTAGCACACTCCCTCCGCATCCCCTTCGAGTTCCACGCCGTTGGGGAACAACTCGAAGATCTCAAACCTAGTATGCTGAATCGTCGAGTCGGCGAGGCCTTAGCCGTGAACGCTGTGAACCGCCTCCACCGCGTCCCTGGGAGCCACCTCGGGAATTTGCTCAGCATGATAAGGGACCAGGCACCGAACATAGTGACCTTGGTGGAGCAAGAAGCGAGCCACAACGGGCCTTACTTTTTGGGAAGGTTTCTGGAGGCGTTGCACTACTACTCGGCAATCTTCGACTCGCTGGACGCGACATTTCCGGCAGAGTCAGCACAGCGGGCGAAGGTGGAGCAGTACATATTCGCGCCAGAGATACGGAACATCGTGGCGTGCGAGGGCGCGGCGAGGTTCGAGCGGCACGAGAGATTGGAGAAGTGGCGGAAGATTATGGAGGGGAAGGGGTTCAAGGGCATGGCTCTTAGTCCTAATGCCGTTACGCAGTCGAAGATTTTGTTGGGGTTGTATTCGTGTGAGGGCTATCGCTTGACCGAGGATAAAGGCTGTTTGCTTCTTGGCTGGCAAGATAGAGCCATTGTTGCTGCGTCTGCATGGCGGTGTTGA 1968 0.5152 MINSLCGSSVSLKSEHNNSRTKTSSNDSVLQSKKNNATQSSSDLDTSLTPLSLNLPALKFDLDGDVEVQSPDSSMWESFFADQLDADFMISSPVRNVPSPQASSYNCNYNYTQGMQGQSLSGCSPPRFSSSQIGAFNSSHKGKGLSPLHRVFNSPNNQYMQHVENLSLPAIEEFLEDYQGYSSNKVSSDIASSSECFDLSSQIPSMLDGLTMPNSSRYHEDETLVHGGVAGSRSSQISQESDMYHQMGSMASASLSQALQQERYHEKQQKQQQENLMLPIPIGIEQEQDSGLQLVHLLLACAEAVAKEEYMVARRYLHHLNRVVTPLGDSMQRVAACFTDSLSVRLNTTLTPKPSKPTPPSPSNSLEVLKIYQIVYQACPYVKFAHFTANQAIFEAFETEDRVHVIDLDILQGYQWPAFMQALAARPGGAPFLRITGVGPTLDGVRETGRCLTELAHSLRIPFEFHAVGEQLEDLKPSMLNRRVGEALAVNAVNRLHRVPGSHLGNLLSMIRDQAPNIVTLVEQEASHNGPYFLGRFLEALHYYSAIFDSLDATFPAESAQRAKVEQYIFAPEIRNIVACEGAARFERHERLEKWRKIMEGKGFKGMALSPNAVTQSKILLGLYSCEGYRLTEDKGCLLLGWQDRAIVAASAWRC 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00793 655 ProSiteProfiles GRAS family profile. 285 654 IPR005202 -
Cca07g00793 655 PANTHER GRAS FAMILY PROTEIN RAM1 34 653 - -
Cca07g00793 655 MobiDBLite consensus disorder prediction 1 46 - -
Cca07g00793 655 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 34 653 IPR005202 -
Cca07g00793 655 Pfam GRAS domain family 294 654 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00793 Cca-Chr7 12778340 12781090 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00793 288 655 GRAS Transcription Factor Family AT1G66350 44.385 1.47e-98 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Cca07g00793 GRAS 4e-131 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00793 - - gmx:100805039 1073.15