Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00789 ATGGAGAAGAACCTTGACGAAAATTCCGATAGTGGCAACACGCATAATTTTTCAATTCATGAAGCCACAGATGCAGCGGAGCCACAGGAGGAGAAGAAAGAAGAGGCTACGGCGTTGCCTCCAGCAGGGAACCTCGAGAACGTTTCCGGAGACATTGATCAATTTCTTGTAACTATGCAACAGAGAAACGATGGTAGAAACAAAGAGAATATTGAGATTCCTCACTTTGTGGAGAAATACTTGGATCTCGTGGAAGAGAAGATATTGAAGTATGACGTAGGGGAAGGCAAAGCGAAATGGGGAGAGGTGGAGGAGGAAGATTTGTGGTTGTTGACAACCGCGGATCGGATTTCGAAGCTGATGACATTGCTGAACGATGAACCGGAGAAAGAGATCAACGATGTAAGACGCTCGCTGGTGAACCGCGTTAACCTGATTCACCAGCGCCTCATGTCGTATCTGGAGGAGGACTTCCGAATCATAATGGAAGAATCTAGAATCCCAACCGAATTGGATCCCGGAGGGAACAGTAATAACAACCAGAACAACTTCGATTACAAAGGGAAACAACGAGAGCAAGATCGAGAAATCGAAGACGACGCCAATTTCCCGGGTTACTCGGAGGAGGCCATTGCCAGCCTGAGAAAGATCGCCAGAGAGATGTTATCCGGCGGCTACGAATCCGAGTGCTGCCAGGTCTACATTATCTCGCGGAGGAACGCGTTCGAGGAGATTCTCCAGAAGCTAGGGTTAGAGAGGATCAGCATCGATGAAATGGTTCAGAAGGTGCAATGGGAGACTCTAGCCAGGGACATGATCCCCGCCTGGATCAATACTCTCAGACAATGCTCGGCGGTATACTTTCCCGGCGAGCGCAAGCTCTCCGATGAAATATTCGCCGAGCATTCATCCGTCGCGGCGGGGCTCTTTAGCAGCCTCAACCGCTGCGTGGTGATCCAGCTTCTCAACTTCGCGGAGGGCGCCGCTATGACGAAGCGTGCCGGGGAGAAACTCTTTAAGCTCCTCGACATGTACGAGAGCCTCCGGGACGTGATCCCGAATATAGTCGGGTTGTTCCCGGAGGAATATGTCGAGGAGCTGAAGACGGAGATGGAACTCGCCAAGTTGCGACTTGGCGAGGCCGCCATCTTCATCTTCTGCGACCTGGAGAACCAGATTAAGTCGGAGACCGCGAGAACCGCGGTCCCCGGTGGGGCGGTGCACCCGCTGACGCGCTACATCATGAACTACCTGACCATAGCGGGGGACTACAAGGACACGTTGGAGCAAGTGTTTATGGAGCATTGGCAGGCGGAGCGCGGGGACTCGagcaggaggcagcagcagcagcagcagcagaagaagaagGAAAACGACGGCGGTTCGGAGAAGGAAGCGGCGTCGCCGTTCGCGGTGCAGGCGATGAGGGTGATGGACCTGCTGGACGCGAGCCTGGAGGGGAAGGCGCGGTTGTACAAAGAGGTGGCGCTGAGGAACTTCTTCATGATGAACAACGGGAGGTACATGCTGCAGAAGATAAAGGGGTCGAGCGAGATGAGCCAGGTGATGGGGGACACGTGGTGCAGGAAGAAGTCTTCGGAGCTGAGGAACTACCACAAGACATACCAGAGGGAAACGTGGAACAGGGTGCTGGCGTGTCTGAACCAAGAGGGGTTGAGCGTGAACGGGAAGGTGCACAAGCCGGTGCTGAAGGAGAGGTTCAAGAGCTTCAACTCGCTGTTCGACGAGATCCACAAGACGCAGAGCACGTGGGTGGTGAAGGACGAGCAGCTTCAGTCGGAGCTTAGGGTTTCGATTTCCTCGGTGGTGATTCCGGCGTACAGGTCCTTCGTGGGGAGGTTCGCGCAGATTTTCGACCCCGGGAGACAGACGGAGAAGTATATAAAGTACCAAGCTGAAGACATAGAGACTTACATTGATGAGTTGTTTGATGGGAAGCCTCACCAGTCTATTGGTAGAAGGAGAACATGA 1992 0.5236 MEKNLDENSDSGNTHNFSIHEATDAAEPQEEKKEEATALPPAGNLENVSGDIDQFLVTMQQRNDGRNKENIEIPHFVEKYLDLVEEKILKYDVGEGKAKWGEVEEEDLWLLTTADRISKLMTLLNDEPEKEINDVRRSLVNRVNLIHQRLMSYLEEDFRIIMEESRIPTELDPGGNSNNNQNNFDYKGKQREQDREIEDDANFPGYSEEAIASLRKIAREMLSGGYESECCQVYIISRRNAFEEILQKLGLERISIDEMVQKVQWETLARDMIPAWINTLRQCSAVYFPGERKLSDEIFAEHSSVAAGLFSSLNRCVVIQLLNFAEGAAMTKRAGEKLFKLLDMYESLRDVIPNIVGLFPEEYVEELKTEMELAKLRLGEAAIFIFCDLENQIKSETARTAVPGGAVHPLTRYIMNYLTIAGDYKDTLEQVFMEHWQAERGDSSRRQQQQQQQKKKENDGGSEKEAASPFAVQAMRVMDLLDASLEGKARLYKEVALRNFFMMNNGRYMLQKIKGSSEMSQVMGDTWCRKKSSELRNYHKTYQRETWNRVLACLNQEGLSVNGKVHKPVLKERFKSFNSLFDEIHKTQSTWVVKDEQLQSELRVSISSVVIPAYRSFVGRFAQIFDPGRQTEKYIKYQAEDIETYIDELFDGKPHQSIGRRRT 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00789 663 SUPERFAMILY Cullin repeat-like 116 651 IPR016159 -
Cca07g00789 663 Gene3D Exocyst complex component Exo70 97 660 - -
Cca07g00789 663 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 40 658 - -
Cca07g00789 663 MobiDBLite consensus disorder prediction 1 47 - -
Cca07g00789 663 Pfam Exo70 exocyst complex subunit 275 648 IPR046364 GO:0000145|GO:0005546|GO:0006887
Cca07g00789 663 PANTHER EXOCYST COMPLEX PROTEIN EXO70 40 658 IPR004140 GO:0000145|GO:0006887
Cca07g00789 663 MobiDBLite consensus disorder prediction 449 463 - -
Cca07g00789 663 MobiDBLite consensus disorder prediction 169 196 - -
Cca07g00789 663 MobiDBLite consensus disorder prediction 439 466 - -
Cca07g00789 663 MobiDBLite consensus disorder prediction 171 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00789 Cca-Chr7 12634207 12636722 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00789 44 663 EXO70 exocyst subunit family AT5G13990 50.000 0.0 598
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00789 K07195 - gmx:100820172 934.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00789 07 12634207 12636722 Cca08g01058 08 27305090 27307701 PCT