Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00785 ATGGGTAGCTGCCCCTGTTTCGGGTCGAGGAAGAAGAGCAAAGAGAAGAACGCCAAGGCTGGGGAAGAAGAAACCAAGATTAGCAAATCAGAGAATATTGATGTCCTTCGAGCATCTTCAGATCTTAGACCAGAAGATGACCCAACAGAGGAGGGTGACAACTCTAAAAAGGCTCAGATATTTACCTTCCGAGAGCTTGCAACAGCAACAAAAAATTTTAGGGATGAAACCTTTATTGGCCAAGGTGGATTTGGCATTGTTTACAAAGGAACGATAGCAAAAATAAATCAGGTTGTAGCTGTTAAGAGACTTGATACTACCGGTGTTCAAGGGGAGAAAGAATTTCTGGTGGAAGTTCTCATGCTTTCTCTTCTACGCCATTCCAACCTTGTTAATATGATTGGTTACTGTGCTGAAGGGGATCAACGTCTTCTAGTGTATGAGTACATGCCTTTGGGATCTTTGGAATCTCATCTTCATGATATTCCACCTGATGAAGACCCACTTGATTGGAATACCAGAATGATGATAGCTTGTGGAGCAGCAAAAGGACTAAATTATCTTCACAATGAAGCAAAGCCTTCTGTTATATACAGGGATCTAAAATCATCCAACATACTGTTGGATGAAGCTTTCTTTCCAAAACTTTCTGATTTTGGGCTTGCAAAATTTGGTCCAACTGGAGATCAATCATATGTTGCCACTAGGGTCATGGGAACACAAGGTTACTGTGCCCCTGAATATGCCACTAGTGGAAAATTAACAATGAGATCTGACATTTACAGTTTTGGGGTTGTGTTGTTAGAAATAATTACTGGACGCAGAGCATATGATGATAACCGTGACACTGAAAAGCATCTTGTAGACTGGGCACGCCCAATGTTTAGAGACAAAAAGTATTTTCCAAGATTGGCAGATCCAAGGTTGAAAGGTCACTACTCAGGATCTTATCTATCAATGGCCGTTGAATTGACAGCCATGTGTCTTCGAGAAGAGCCACGTCATCGACCTAATGCAAGTGATATAGTGGAAGCTCTAGAGTTCTTGTCATCCAAACAATATACCCCAAAAAAGTCCAACACAACAGAGATAGCGGGTGGAGAATCCCCAACCGAAATATCTGCCATTTTGCCTAAAGAATCACAAAGAGAGCGAGCTGTTGCTGAGGCTAAGCTGTGGGGGGAGACATGGAGGCAGAGACGACAAAGTGAGCAAAGTAGTCCAGAGGAAGCAAATAGGTAG 1242 0.4243 MGSCPCFGSRKKSKEKNAKAGEEETKISKSENIDVLRASSDLRPEDDPTEEGDNSKKAQIFTFRELATATKNFRDETFIGQGGFGIVYKGTIAKINQVVAVKRLDTTGVQGEKEFLVEVLMLSLLRHSNLVNMIGYCAEGDQRLLVYEYMPLGSLESHLHDIPPDEDPLDWNTRMMIACGAAKGLNYLHNEAKPSVIYRDLKSSNILLDEAFFPKLSDFGLAKFGPTGDQSYVATRVMGTQGYCAPEYATSGKLTMRSDIYSFGVVLLEIITGRRAYDDNRDTEKHLVDWARPMFRDKKYFPRLADPRLKGHYSGSYLSMAVELTAMCLREEPRHRPNASDIVEALEFLSSKQYTPKKSNTTEIAGGESPTEISAILPKESQRERAVAEAKLWGETWRQRRQSEQSSPEEANR 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00785 413 PANTHER OS07G0668900 PROTEIN 5 362 - -
Cca07g00785 413 MobiDBLite consensus disorder prediction 394 413 - -
Cca07g00785 413 PANTHER OS07G0668900 PROTEIN 5 362 - -
Cca07g00785 413 ProSiteProfiles Protein kinase domain profile. 73 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g00785 413 Pfam Protein kinase domain 74 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g00785 413 ProSitePatterns Protein kinases ATP-binding region signature. 79 102 IPR017441 GO:0005524
Cca07g00785 413 ProSitePatterns Serine/Threonine protein kinases active-site signature. 196 208 IPR008271 GO:0004672|GO:0006468
Cca07g00785 413 MobiDBLite consensus disorder prediction 1 55 - -
Cca07g00785 413 Gene3D Phosphorylase Kinase; domain 1 45 149 - -
Cca07g00785 413 CDD STKc_IRAK 79 347 - -
Cca07g00785 413 MobiDBLite consensus disorder prediction 9 55 - -
Cca07g00785 413 SMART serkin_6 73 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g00785 413 Gene3D Transferase(Phosphotransferase) domain 1 150 369 - -
Cca07g00785 413 MobiDBLite consensus disorder prediction 357 382 - -
Cca07g00785 413 SUPERFAMILY Protein kinase-like (PK-like) 56 349 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00785 Cca-Chr7 12554486 12560518 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00785 3 407 Glycoside Hydrolase AT3G07070 51.773 1.72e-140 405
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Cca07g00785 Pkinase 2.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00785 K13430 - gmx:100809298 663.685