Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00783 ATGGAGCTCCAAAACCATTCCGAGTCTATTGGGTTTAGGTTTGATCCTACTGATGATATTCTTGCGGGTTACTACCTAAGGAGAATCTTAGCTCAATCACTCCCTAATGATGTCATTCAAGAATATGATGTGTTTCAAACTCAGCCTTGGGGGCTGCCAGGAGGTGAGAAGCATCTGAATTGGCTGAAGTTTTTCTTCTACAATATTGGGGCTCGTGTGTTCGAAAACCCTGATAAGAGAGTTGCTGGGAATGGCCAATGGAGAATAATGGAGAAAGATGAAGATTTTCAGCTCCCTACCAAACTGCAGTGGATTGCCAAGAGAAACATTTTGGTTTTCTGGGAAGCCAAAGGAAACCGTTTTACTGAAACAAATTGGATGATGCATGAGTTCCACCTTGCCCCAAAATCAAATCCATCTCAGATGACAGATTGGGCTGTGTATCGCATATTCAGCAAGGGGGCAAAAACACAAAAGATTGCAAAAAAGTATAGTGGGGAGACCTCGAATATAAACAATGTTGGAAAATCTGAGGATGTCACACAAAGTCATTGA 555 0.4198 MELQNHSESIGFRFDPTDDILAGYYLRRILAQSLPNDVIQEYDVFQTQPWGLPGGEKHLNWLKFFFYNIGARVFENPDKRVAGNGQWRIMEKDEDFQLPTKLQWIAKRNILVFWEAKGNRFTETNWMMHEFHLAPKSNPSQMTDWAVYRIFSKGAKTQKIAKKYSGETSNINNVGKSEDVTQSH 184
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00783 184 ProSiteProfiles NAC domain profile. 8 153 IPR003441 GO:0003677|GO:0006355
Cca07g00783 184 Gene3D NAC domain 17 159 IPR036093 GO:0003677|GO:0006355
Cca07g00783 184 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 10 162 - -
Cca07g00783 184 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 10 162 - -
Cca07g00783 184 Pfam No apical meristem (NAM) protein 10 133 IPR003441 GO:0003677|GO:0006355
Cca07g00783 184 SUPERFAMILY NAC domain 6 153 IPR036093 GO:0003677|GO:0006355
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Cca07g00783 Cca-Chr7 12401461 12404382 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00783 11 159 NAC Transcription Factor Family AT1G01720 33.742 1.93e-22 89.7
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Cca07g00783 NAM 4.5e-17 No_clan
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00783 - - ccaj:109807086 374.015