Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca07g00783 | ATGGAGCTCCAAAACCATTCCGAGTCTATTGGGTTTAGGTTTGATCCTACTGATGATATTCTTGCGGGTTACTACCTAAGGAGAATCTTAGCTCAATCACTCCCTAATGATGTCATTCAAGAATATGATGTGTTTCAAACTCAGCCTTGGGGGCTGCCAGGAGGTGAGAAGCATCTGAATTGGCTGAAGTTTTTCTTCTACAATATTGGGGCTCGTGTGTTCGAAAACCCTGATAAGAGAGTTGCTGGGAATGGCCAATGGAGAATAATGGAGAAAGATGAAGATTTTCAGCTCCCTACCAAACTGCAGTGGATTGCCAAGAGAAACATTTTGGTTTTCTGGGAAGCCAAAGGAAACCGTTTTACTGAAACAAATTGGATGATGCATGAGTTCCACCTTGCCCCAAAATCAAATCCATCTCAGATGACAGATTGGGCTGTGTATCGCATATTCAGCAAGGGGGCAAAAACACAAAAGATTGCAAAAAAGTATAGTGGGGAGACCTCGAATATAAACAATGTTGGAAAATCTGAGGATGTCACACAAAGTCATTGA | 555 | 0.4198 | MELQNHSESIGFRFDPTDDILAGYYLRRILAQSLPNDVIQEYDVFQTQPWGLPGGEKHLNWLKFFFYNIGARVFENPDKRVAGNGQWRIMEKDEDFQLPTKLQWIAKRNILVFWEAKGNRFTETNWMMHEFHLAPKSNPSQMTDWAVYRIFSKGAKTQKIAKKYSGETSNINNVGKSEDVTQSH | 184 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca07g00783 | 184 | ProSiteProfiles | NAC domain profile. | 8 | 153 | IPR003441 | GO:0003677|GO:0006355 | |
Cca07g00783 | 184 | Gene3D | NAC domain | 17 | 159 | IPR036093 | GO:0003677|GO:0006355 | |
Cca07g00783 | 184 | PANTHER | NAC TRANSCRIPTION FACTOR-LIKE PROTEIN | 10 | 162 | - | - | |
Cca07g00783 | 184 | PANTHER | NAC DOMAIN-CONTAINING PROTEIN 82-RELATED | 10 | 162 | - | - | |
Cca07g00783 | 184 | Pfam | No apical meristem (NAM) protein | 10 | 133 | IPR003441 | GO:0003677|GO:0006355 | |
Cca07g00783 | 184 | SUPERFAMILY | NAC domain | 6 | 153 | IPR036093 | GO:0003677|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca07g00783 | Cca-Chr7 | 12401461 | 12404382 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca07g00783 | 11 | 159 | NAC Transcription Factor Family | AT1G01720 | 33.742 | 1.93e-22 | 89.7 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | NAC | Cca07g00783 | NAM | 4.5e-17 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca07g00783 | - | - | ccaj:109807086 | 374.015 |