Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00782 ATGGAGCTTCCAAATGAAAGTGAGGCAAGAACCTACAGGCTCCCAATTGGGTTCTGTTTTGATCCCTCAGATGAAGTTCTCACAGGCTATTACCTTCGGAAGAAGATATTATCTCAACCACTTCCCCATAACTTCATACCAGAGTGTGATGTTTTCCAAACTGAACCATGGAGGCTTCAAGGAGGGGGAAGGCATTTGAATTGGCAGAAATATTTCTTCTATGATCCCAAGGACCGTGTGTTTGAAAACACGGTCAAGATAGGTGCTGGAAATGGGGAATGGAGGGCGGTGGAAAGAGGCGAGCAAATAGAGCTTTCTAGCATACAGATGATTGCTCAAAGGAACACTTATGTCTTCTGGGAAAGAAATGACAACAACTTCATAAGATCAAACTGGGTGATGAAAGAGTTTCACCTTGCTCTCAACTCTAATCCATCCTTGAGATTTTGCATGGGTGTGTATCGGATATTCGAGATGGAAGGAAGGAGGGCAAAAAAGCTGAGAATGTCTGGAGAGGAGGCTTCAACAAGTGGCAATGATGGAGAAGCCAACGATGTCACACCCACTATCGGTGATTTGACACAAGAGTATGGTAGTGTGGCTAGTACTTCCCAAGTTGAGTGA 624 0.4439 MELPNESEARTYRLPIGFCFDPSDEVLTGYYLRKKILSQPLPHNFIPECDVFQTEPWRLQGGGRHLNWQKYFFYDPKDRVFENTVKIGAGNGEWRAVERGEQIELSSIQMIAQRNTYVFWERNDNNFIRSNWVMKEFHLALNSNPSLRFCMGVYRIFEMEGRRAKKLRMSGEEASTSGNDGEANDVTPTIGDLTQEYGSVASTSQVE 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00782 207 ProSiteProfiles NAC domain profile. 14 155 IPR003441 GO:0003677|GO:0006355
Cca07g00782 207 Gene3D NAC domain 23 165 IPR036093 GO:0003677|GO:0006355
Cca07g00782 207 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 14 165 - -
Cca07g00782 207 MobiDBLite consensus disorder prediction 172 207 - -
Cca07g00782 207 SUPERFAMILY NAC domain 11 154 IPR036093 GO:0003677|GO:0006355
Cca07g00782 207 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 14 165 - -
Cca07g00782 207 MobiDBLite consensus disorder prediction 168 207 - -
Cca07g00782 207 Pfam No apical meristem (NAM) protein 15 139 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00782 Cca-Chr7 12385607 12387040 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00782 14 145 NAC Transcription Factor Family AT3G04070 30.435 5.05e-19 82.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Cca07g00782 NAM 3.8e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00782 - - ccaj:109809200 312.768