Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00771 ATGTTCCCCTGCGACTACTGCCACTCCAGACCCGCCCTTCTCTTCTGCAAGCCCGACGCCGCCAAACTCTGCTTGCCATGCGACCACCACGTCCACGCCGCCAACGCCCTCTCCCTCAAGCACGTGCGCTACCCCATTTCCGACACGTGCCACCCCCACTGCCCCCACGCCCTctccggctccccctccgtctcccagatcgcctccgcgctccgcctccTCTCCCACGCTAAGGACGAGCTCTACCGCCAGCTCGCCGAAATCGCGCGCCCGAGGAACGAGACTCCTCAATTGGAGCTCCACTCTCAAAACGACGCCGTTCACGACGCCCCGCTGCACCACCACTGCACGCCCTTCACGCCCTTCCTCATGTTGCCCAATTCCGAATCGGACCCTCACGCCGCCAAGAGTAGCGATGACGGTTACGGAACCGAAGCTGGGGATCTTCTCTGGAATTATAACCCCGCGTATCAGCCTCCTCAGGTGTGGGATTTTCAATTGCAGGAATCAAGAGATTGTGGCGAGCCGGGAGTGGTGACATTTGATGGTCTTGAAGTTCCAAAGGCATTTCAGGACGTGCACAATATGAATTACTCGACAATTGGCGATGATCTTCTATCAAGAAATAATCAATCGGATCAATCATCATCAAGCCATGAAAAGAAGAAAGAAGAAAGCAAGAGAGCTAAAGGTGGGTTATCATCGGAGTCCAAATTGTTTGAATCCATACCGTACAGTGGCACCAACAATGTTGTAGCCATGGAGCATCTTGTCGGTGGGAATGAATGTTTCAGCACCTTAAAAGCCAGGGTTAGTTTGGAAGAGTTGGCTAAGAATAGAGGGGATGCCATGTTGCGCTATAAGGAGAAGAAGAAAACTCGAAGGTATGATAAGAAAATTCGCTATGAATCAAGGAAGGCCAGGGCTGATACTAGAAAGAGAGTGAGAGGGAGATTTGTGAAGGCAAGTGATGTTCAAGCATGA 984 0.4939 MFPCDYCHSRPALLFCKPDAAKLCLPCDHHVHAANALSLKHVRYPISDTCHPHCPHALSGSPSVSQIASALRLLSHAKDELYRQLAEIARPRNETPQLELHSQNDAVHDAPLHHHCTPFTPFLMLPNSESDPHAAKSSDDGYGTEAGDLLWNYNPAYQPPQVWDFQLQESRDCGEPGVVTFDGLEVPKAFQDVHNMNYSTIGDDLLSRNNQSDQSSSSHEKKKEESKRAKGGLSSESKLFESIPYSGTNNVVAMEHLVGGNECFSTLKARVSLEELAKNRGDAMLRYKEKKKTRRYDKKIRYESRKARADTRKRVRGRFVKASDVQA 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00771 327 MobiDBLite consensus disorder prediction 201 233 - -
Cca07g00771 327 ProSiteProfiles CCT domain profile. 280 322 IPR010402 GO:0005515
Cca07g00771 327 SMART bboxneu5 3 46 IPR000315 GO:0008270
Cca07g00771 327 ProSiteProfiles Zinc finger B-box type profile. 1 46 IPR000315 GO:0008270
Cca07g00771 327 MobiDBLite consensus disorder prediction 215 233 - -
Cca07g00771 327 CDD Bbox1_BBX-like 3 46 - -
Cca07g00771 327 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 14-LIKE 98 325 - -
Cca07g00771 327 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 14-LIKE 3 51 - -
Cca07g00771 327 Pfam CCT motif 280 322 IPR010402 GO:0005515
Cca07g00771 327 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 98 325 - -
Cca07g00771 327 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 3 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00771 Cca-Chr7 12051563 12055182 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00771 1 324 C2C2-CO-like Transcription Factor Family AT2G33500 30.193 6.69e-38 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Cca07g00771 CCT 6e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00771 - - ccaj:109802306 646.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00771 07 12051563 12055182 Cca07g00771 07 12051563 12055182 ECH