Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00761 ATGGCGAGCAGGTACTGGGCTGTGTCTCTTCCCGTTCACGACTCCGCTTCTCAACTCTGGAACCAATTGCAGCAGCGAATCTCCACCCATTCCTTCGACACTCCTCTCTACAGATTCAACATCCCCAACCTCCGCGTCGGAACCCTAGATTCTCTCCTCTCTCTCAGCGATGATCTCGCCAAGTCCAACAATTTCGTCGAGGGCGTCTCGCACAAGATCAGGCGCCAGATTGAGGAGCTCGAGAGGCTTTCCGGCACCGACGCCGGCGGCCTCACCGTCGACGGCGTCCCCGTCGATTCCTACTTGACCAGGTTTGTTTGGGATGATGCTAAGTACCCGACCATGTCGCCTTTGAAGGAGATCGTCGATGGTATTCACAGTCAAGTGGCAAAGATCGAGGATGATCTCAAGGTTCGTGTTTCAGAGTATAACAATATCCGCAGTCAACTTAATGCTATCAATCGAAAGCAAACTGGAAGCTTAGCAGTCCGTGATCTTTCAAACTTGGTAAAACCTGAGGACATTATAACTTCAGATCATTTAACTACCCTCCTTGCAATTGTTTCCAAGTATTCACAGAAGGATTGGCTCTCAAGCTATGAAACGTTGACAAGTTATGTGGTCCCCAGGTCTTCTAAGAAGTTGTTTGAGGATAACGAATATGCTCTTTATACCGTGACACTCTTCAATCGTGATGCGGATAATTTTAGAACTAGTGCACGGGAAAAAGGGTTCCAAATTCGCGACTTTGAATACAGTCCAGAAACACATGAGAACCGAAAGCAGGAATTAGAAAAACTTATGCAAGATCAGGAAAGATTGAGGACTTCTCTGTTGCAATGGTGCTATACCAGTTATGGAGAGGTTTTCAGTTCCTGGATGCACTTCTGTGCTGTGCGTTTATTTTCTGAGAGCATTCTGAGATATGGTTTGCCACCATCTTTCTTGGCATGTGTTTTAGCTCCTACTGTAAAATCCGAGAAGAAAGTCCGATCCATCCTTGAAGGATTGAGTGATAGCACAAACAGTGCATACTGGAAGGCCGAGGATGAAGTAGGTGCTGGGATGGCTGGCCTAGCAGGTGGTGATGCCGATGCTCACCCCTATGTTTCTTTCACTATCAATCTTGTTTGA 1134 0.47 MASRYWAVSLPVHDSASQLWNQLQQRISTHSFDTPLYRFNIPNLRVGTLDSLLSLSDDLAKSNNFVEGVSHKIRRQIEELERLSGTDAGGLTVDGVPVDSYLTRFVWDDAKYPTMSPLKEIVDGIHSQVAKIEDDLKVRVSEYNNIRSQLNAINRKQTGSLAVRDLSNLVKPEDIITSDHLTTLLAIVSKYSQKDWLSSYETLTSYVVPRSSKKLFEDNEYALYTVTLFNRDADNFRTSAREKGFQIRDFEYSPETHENRKQELEKLMQDQERLRTSLLQWCYTSYGEVFSSWMHFCAVRLFSESILRYGLPPSFLACVLAPTVKSEKKVRSILEGLSDSTNSAYWKAEDEVGAGMAGLAGGDADAHPYVSFTINLV 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00761 377 SUPERFAMILY Vacuolar ATP synthase subunit C 2 376 IPR036132 GO:0015078|GO:0033180|GO:1902600
Cca07g00761 377 Pfam V-ATPase subunit C 5 370 IPR004907 GO:0033180|GO:0046961|GO:1902600
Cca07g00761 377 Gene3D - 163 251 - -
Cca07g00761 377 CDD V-ATPase_C 5 374 IPR004907 GO:0033180|GO:0046961|GO:1902600
Cca07g00761 377 PANTHER V-TYPE PROTON ATPASE SUBUNIT C 1 376 - -
Cca07g00761 377 Coils Coil 257 277 - -
Cca07g00761 377 PANTHER V-TYPE PROTON ATPASE SUBUNIT C 1 376 IPR004907 GO:0033180|GO:0046961|GO:1902600
Cca07g00761 377 Gene3D Vacuolar atp synthase subunit c; domain 1 9 334 - -
Cca07g00761 377 Gene3D - 41 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00761 Cca-Chr7 11881725 11887641 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00761 1 376 Primary Pumps ATPases(2) AT1G12840 81.915 0.0 646
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00761 K02148 - gmx:100813963 682.945
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00761 07 11881725 11887641 Cca07g00761 07 11881725 11887641 ECH