Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00760 ATGGCTCTTCCCGACTCCTCCTCTCGCCGCAACTCCCTCATCCCCTCCTTCATCTACTCCTCTTCCTCCAAAACCCTACCTCTCCACCAAATGCTCAACTccgccgccgcctcctccctcgcgccgccgcccgcgtccgccgccgGATCCCGCGGCCTCATCATTCCCTCTCCCAGCGAGTCCCGCAAGATCGAGCTCTACTCGCCGGCTTTCTACGCTGCCTGTACCGCCGGTGGAATCCTCAGCTGTGGCCTCACTCACATGGCTGTCACTCCTCTTGACCTTGTCAAGTGTAATATGCAGATTGACCCTGCTAAGTACAAGAGCATCTCTTCTGGGTTTGGAGTTTTGCTCAAGGAGCAGGGAGTTAAGGGCTTTTTCCGTGGTTGGGTACCTACCTTGCTTGGTTACAGTGCACAGGGTGCTTGCAAATTTGGATTCTATGAGTTCTTTAAGAAGTATTACTCTGATATTGCTGGACCGGAGTATGCAAGCAAGTACAAGACTTTGATCTACCTTGCTGGTTCAGCATCTGCTGAGGTTATTGCTGATATTGCTCTTTGCCCCTTCGAGGCTGTGAAGGTCCGTGTCCAAACTCAGCCTGGTTTTGCAAGGGGTCTGTCTGATGGGCTCCCAAAATTTGTCAGATCTGAAGGAACATTAGGGCTGTACAAGGGATTAGTGCCTCTGTGGGGACGGCAGATTCCATACACAATGATGAAGTTTGCTTCTTTTGAGACCATTGTTGAGCTGATCTATAAGCATGCCATCCCCACACCGAAGAACGAGTGCAGCAAAGGTCTGCAACTTGGAGTCAGTTTTGCTGGTGGATATATTGCTGGTGTACTTTGTGCAATTGTGTCTCATCCTGCTGATAATCTCGTCTCTTTTCTGAACAACGCCAAAGGAGCAACAGTTGGTGATGCTGTGAATAAGCTTGGTTTATGGGGTCTCTTCACACGTGGTCTTCCCCTCCGTATTGTTATGATTGGAACTCTTACCGGAGCCCAATGGGGAATATATGATGCATTCAAAGTCTCTGTTGGACTTCCAACCACTGGTGGTCCTGCTCCTGCGGCTGCTCCAGCTCCTGGTTCTGAGCTTGCAAAGGCATAG 1116 0.4758 MALPDSSSRRNSLIPSFIYSSSSKTLPLHQMLNSAAASSLAPPPASAAGSRGLIIPSPSESRKIELYSPAFYAACTAGGILSCGLTHMAVTPLDLVKCNMQIDPAKYKSISSGFGVLLKEQGVKGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDIAGPEYASKYKTLIYLAGSASAEVIADIALCPFEAVKVRVQTQPGFARGLSDGLPKFVRSEGTLGLYKGLVPLWGRQIPYTMMKFASFETIVELIYKHAIPTPKNECSKGLQLGVSFAGGYIAGVLCAIVSHPADNLVSFLNNAKGATVGDAVNKLGLWGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVSVGLPTTGGPAPAAAPAPGSELAKA 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00760 371 Pfam Mitochondrial carrier protein 73 156 IPR018108 -
Cca07g00760 371 Pfam Mitochondrial carrier protein 169 255 IPR018108 -
Cca07g00760 371 PANTHER MITOCHONDRIAL PHOSPHATE TRANSPORTER 6 364 - -
Cca07g00760 371 ProSiteProfiles Solute carrier (Solcar) repeat profile. 167 251 IPR018108 -
Cca07g00760 371 SUPERFAMILY Mitochondrial carrier 73 343 IPR023395 -
Cca07g00760 371 Gene3D Mitochondrial carrier domain 70 347 IPR023395 -
Cca07g00760 371 ProSiteProfiles Solute carrier (Solcar) repeat profile. 70 154 IPR018108 -
Cca07g00760 371 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 6 364 IPR044677 GO:0005315|GO:1990547
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00760 Cca-Chr7 11853044 11857168 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00760 7 371 Chloroplast and Mitochondria Gene Families AT5G14040 78.723 0.0 578
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00760 K15102 - gmx:547633 653.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00760 07 11853044 11857168 Cca07g00760 07 11853044 11857168 ECH
Cca07g00760 07 11853044 11857168 Cca08g01045 08 26598575 26603929 PCT