Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00737 ATGTTTTCCGGCGAGATTCCGGCGAGCTTAGGGAATCTTCGGTTCCTCGAGGTTCTCGAGCTGCAAGGTAACAACTTCTCCGGGAGAATCTCCGACAAGATGAGTTTCACTTTTCTTCGCTGTCTTCGTTTTGTTAACCTCTCTGGAAATGCCTTCTCTGGTTCGTTGCCGAGTGAAATGATTGGCTCTGGGAGTGTAAAAATCGTTGATTTATCGAATAATCAGTTCTCTGGGGTGATTCTGTTGAATGGTTCTTGTGATTCCTTGAAGCATTTGAAGCTGTCTCATAACTTTTTGACTGGGGAGATTCCACCCCAAATTGGGAAATGTAGAAACTTGAGGACCCTTTTGGTTGATGGGAACATTTTGGAAGGTAGAATCCCTTCTGAGATTGGGGGTGTTGTTGAGCTTAGGGTTCTAGATGTTTCTAGAAACTCCCTCACTGGAAGGGTCCCTAAGGAGTTGGCTAATTGTGTTAAACTTTCTGTGCTTGTGCTTACTGATTTGTTTGAGGATCATAGCGAGGGAGGCTTGGAGGATGGGTTTAGAGGAGAGTTTAATGCCTTTGTTGGGAACATACCTCATGAAGTGTTGTTGCTTTCGAGTCTAAGGGTTTTGTGGGCACCAAGAGCGAATCTTGGCGGCCGGTTGCCGAGTGGTTGGTCGGATTTGTGCTCTCTGAGAGTGCTCAATTTGGCGCAGAATTATGTCACGGGCGTGGTGCCGGAGAGGTTGGGGATGTGTAGGAATTTAAGCTTCTTGGACTTGAGTTCTAACAATTTGGTGGGGTATTTGCCTACATTGCAGCTTCAGGTTCCTTGTATGATGTACTTCAATATCAGCAGGTATAATATATCTGGCACTCTTGCTGGATTTAGGAAAGAAAGGTGTCAGGTGAGTGCACTAGAGTTAGATGGTTTTAATGATGATGCATACTTTGATATTCCTGTTTGGAGCTTTCAGAAGAATGCTCTCATTGGATCGGGTTTTGAAGAGACTAGCACTGTTGTTGTTAGCCATGATTTCAGTTGGAACAGTTTTGTGGGATCCTTGCCTTTGTTCTCTCTTGGAGATAATCTTTTTAGTGCAAATCATAAGGTCTCCTATGCACTTTCTCTCAATAATAATAAGTTCAATGGAACTCTGCCGTATCAGTTAGTTTCAAACTGTAATGAACTCAAGACATTGTCAGTTAACTTGAGTGTGAACCAACTATCTGGTGGGAATTCGCAAGCATCGATCTTGGGATGCCTGAAGTTGACAGATTTTGAAGCAGCATACAACCAGATTGATGGGTCGATTGGGCCTGGTATAGGTGACTTGGTGATGCTTCAGCATCTTGACTTGAGTGGGAACAAACTATCTGGATCACTGCCTAATCAGTTGGGAAACTTGCAAAACATGAAATGGATGCTTTTGGGAGGAAACAATCTAACAGGGGTAATTCCTTCCCAACTTAGTCAATTGACTTCCCTTGCTGTTTTGAATCTTTCTCACAATGCTCTAGTTGGAACAATTCCCACAAGTTTGTCTAATGCCAAAAGTCTTGAAATTCTGTTGCTAGATCACAACAACCTCTCTGGGGAAATACCTTTATCTTTTTCTACTCTTTCCAATCTTGTTCAACTGGATGTTTCTTTTAACAATCTTTCTGGTCATATTCCTCATCTTCAACACCACAATTGTGATTCCTATAAAGGAAATGAACACCTGCACTCTTGTCCCGATCCGTATTCTGACTCACCCGCTTCTCTTCCAGAACCCCTTGAAATCCAGCATACTCATAAACAAAGGAAGTTTAGGACATTAGTTATTGCTGTGGTCACTTCTGCTTCTGTGACTCTCTGCACACTTTTGGGAATAGTATTGGTGATCTTCTCTGGAAGGAGTAAATTCGGTCGGCTTAGCAGTATTCGAAGGCGGCAGGTAGTGACCTTTCAAGATGTTCCAACTGAATTGAGTTACGACAGTGTGGCCATGGCTACCGGAAATTTCAGCATCCGGTTTCTAATTGGCACTGGTGGCTTTGGGTCAACGTACAAGGCGGAACTGTCCCCAGGTTTTCTCGTTGCCATAAAGAGGTTGTCCATAGGTAGATTTCAAGGGATTCAACAGTTTGAAACAGAAATTAGGACATTAGGGAGAATTCGGCACAAGAATCTTGTGACACTTATTGGCTACTATGTAGGAAAGGCTGAAATGTTCTTAATTTACAACTACCTTTCTGGGGGGAACCTTGAAGCTTTCATACACGACAGGTCAGGGAAAAATGTGCAGTGGCCAGTTATTTACAAAATAGCAAAAGACATAGCAGAGGCTCTTGCTTACCTTCATTACTCTTGCGTTCCTCGCATTGTTCATAGGGATATTAAACCTAGCAACATCTTACTTGATGAAGATCTTAATGCCTACATATCAGATTTTGGCTTGGCGCGGCTGCTGGAGGTATCAGAAACTCATGCCACCACTGATGTGGCAGGCACATTTGGTTACGTCGCGCCGGAATATGCCACCACTTGCAGGGTTTCTGACAAAGCAGATGTTTACAGTTTTGGTGTAGTGTTGTTAGAGTTGATGTCGGGAAGAAAGTCACTTGATCCATCGTTTTCTGAATATGGAAATGGATTCAATATTGTTCCATGGGCAGAACTGCTAATGACCGAAGGCCGGTGTTCCGAGCTATTTTCATCTACTTTGTGGGAATCGGGGCCTAAGGAAAAACTGTTGGGGCTTTTAAAGCTCGCATTAACATGCACAGAAGAGACTCTTTCTATTCGACCATCAATGAAACAAGTTCTTGAGAAATTGAAACAGTTGAAAAGTTGA 2826 0.4303 MFSGEIPASLGNLRFLEVLELQGNNFSGRISDKMSFTFLRCLRFVNLSGNAFSGSLPSEMIGSGSVKIVDLSNNQFSGVILLNGSCDSLKHLKLSHNFLTGEIPPQIGKCRNLRTLLVDGNILEGRIPSEIGGVVELRVLDVSRNSLTGRVPKELANCVKLSVLVLTDLFEDHSEGGLEDGFRGEFNAFVGNIPHEVLLLSSLRVLWAPRANLGGRLPSGWSDLCSLRVLNLAQNYVTGVVPERLGMCRNLSFLDLSSNNLVGYLPTLQLQVPCMMYFNISRYNISGTLAGFRKERCQVSALELDGFNDDAYFDIPVWSFQKNALIGSGFEETSTVVVSHDFSWNSFVGSLPLFSLGDNLFSANHKVSYALSLNNNKFNGTLPYQLVSNCNELKTLSVNLSVNQLSGGNSQASILGCLKLTDFEAAYNQIDGSIGPGIGDLVMLQHLDLSGNKLSGSLPNQLGNLQNMKWMLLGGNNLTGVIPSQLSQLTSLAVLNLSHNALVGTIPTSLSNAKSLEILLLDHNNLSGEIPLSFSTLSNLVQLDVSFNNLSGHIPHLQHHNCDSYKGNEHLHSCPDPYSDSPASLPEPLEIQHTHKQRKFRTLVIAVVTSASVTLCTLLGIVLVIFSGRSKFGRLSSIRRRQVVTFQDVPTELSYDSVAMATGNFSIRFLIGTGGFGSTYKAELSPGFLVAIKRLSIGRFQGIQQFETEIRTLGRIRHKNLVTLIGYYVGKAEMFLIYNYLSGGNLEAFIHDRSGKNVQWPVIYKIAKDIAEALAYLHYSCVPRIVHRDIKPSNILLDEDLNAYISDFGLARLLEVSETHATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELMSGRKSLDPSFSEYGNGFNIVPWAELLMTEGRCSELFSSTLWESGPKEKLLGLLKLALTCTEETLSIRPSMKQVLEKLKQLKS 941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00737 941 Gene3D Ribonuclease Inhibitor 1 305 IPR032675 -
Cca07g00737 941 PRINTS Leucine-rich repeat signature 444 457 - -
Cca07g00737 941 PRINTS Leucine-rich repeat signature 489 502 - -
Cca07g00737 941 ProSitePatterns Serine/Threonine protein kinases active-site signature. 785 797 IPR008271 GO:0004672|GO:0006468
Cca07g00737 941 Gene3D Phosphorylase Kinase; domain 1 627 740 - -
Cca07g00737 941 SMART LRR_typ_2 134 158 IPR003591 -
Cca07g00737 941 SMART LRR_typ_2 441 465 IPR003591 -
Cca07g00737 941 SMART LRR_typ_2 537 559 IPR003591 -
Cca07g00737 941 SMART LRR_typ_2 86 110 IPR003591 -
Cca07g00737 941 SMART LRR_typ_2 224 248 IPR003591 -
Cca07g00737 941 SMART LRR_typ_2 39 63 IPR003591 -
Cca07g00737 941 SMART LRR_typ_2 489 513 IPR003591 -
Cca07g00737 941 Gene3D Ribonuclease Inhibitor 341 582 IPR032675 -
Cca07g00737 941 Pfam Leucine rich repeat 467 526 IPR001611 GO:0005515
Cca07g00737 941 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 1 940 - -
Cca07g00737 941 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RPK2 1 940 - -
Cca07g00737 941 SUPERFAMILY L domain-like 2 559 - -
Cca07g00737 941 Pfam Protein kinase domain 670 867 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g00737 941 ProSitePatterns Protein kinases ATP-binding region signature. 671 693 IPR017441 GO:0005524
Cca07g00737 941 ProSiteProfiles Protein kinase domain profile. 665 939 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g00737 941 SMART serkin_6 665 940 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g00737 941 CDD STKc_IRAK 671 939 - -
Cca07g00737 941 Gene3D Transferase(Phosphotransferase) domain 1 741 940 - -
Cca07g00737 941 SUPERFAMILY Protein kinase-like (PK-like) 643 936 IPR011009 -
Cca07g00737 941 Pfam Leucine Rich Repeat 444 465 IPR001611 GO:0005515
Cca07g00737 941 Pfam Leucine Rich Repeat 88 110 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00737 Cca-Chr7 11351484 11356274 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00737 2 940 Receptor kinase-like Gene Family AT3G02130 45.563 0.0 753
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XV Cca07g00737 Pkinase 7.7e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00737 - - gmx:100795047 1625.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00737 07 11351484 11356274 Cca07g00737 07 11351484 11356274 ECH