Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00733 ATGTCAAGTACTCTTGCAGCAATATTAGGAGGAGCTGCAGGAGCCGTGGCATTGGTAGGGATTGCTATAATACTTATATGGTTTTGCTCGTCTCGTCAGAGAAATGTTTCTAGGACTTCAGAGACAGGGTCCTCTGATCCTTCCCAAGTGGGAAGACATGGTGCAATTGAGTTGCCTGTACGAGATACTAGGCGTTTTGAGATGGAAGAACTATCTCTGGCCACAAAAAATTTCAGTGACAAAAATTTGATTGGAGAAGGGAAATTTGGGGAGGTTTACAAGGGTTTACTTCAAGATGGGATGCTTGTAGCCATCAAAAAACGCCGTGGACTCGCTAGTCAGGAATTTGTTGATGAGGTACGCTACCTCTCGTCTATTCACCATCGGAATCTCGTCACTCTTTTAGGCTACTGCCAGGAGAACAATCTTCAGTTTCTTATATATGAATATGTGCCTAATGGAAGCGTCTCCAGTCACTTGTATGGCGCTGGTCAACAATCGCAAGAGAAGCTAGAATTCAAGCTTAGACTTTCAATAGCTCAAGGTGCAGCTAAAGGTTTGGCTCATCTCCACTCTTTGAGTCCCCGTTTGGTGCATAAGGATTTCAAAACTGCTAATGTTCTTGTGGATGAAAACTTCATTGCTAAGGTGGCAGACGCAGGACTTCGCAATTTTTTGGGGAGAGTTGACATTGCAGGCTCCTCTTCTCAAGTGGCAACAGATGAAATATTCCTTGCATCAGAAGTGAGAGAGTTCAGACGATTTTCTGAAAAGAGCGATGTATACAGCTTTGGGGTATTTTTGCTGGAATTGTTAAGTGGGAAAGAAGCAATAGAATCACCATTTCCGGAGGCTAATGAAAATCTGGTTGAATGGGTGGTAAGCAATCAAGACCGTGGCATGATGTCTTACATCATTGATAGGAGATTGGAGAGTAGTTTTACAGCTGAAGGGATGGAAGAATACATCATGCTCATAATTAGATGCTTAGATCCTTCAAGAAATGAACTTGACAACAATCATGGGAGAAGGAACCCCAATTGTGACTCTTGGAAGCCAGTTATTCAAATCAACAAAATAAAGAAAAAGGAGAATAGGACCAGCTGCTTCCTAAGTGTATAA 1122 0.4234 MSSTLAAILGGAAGAVALVGIAIILIWFCSSRQRNVSRTSETGSSDPSQVGRHGAIELPVRDTRRFEMEELSLATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIKKRRGLASQEFVDEVRYLSSIHHRNLVTLLGYCQENNLQFLIYEYVPNGSVSSHLYGAGQQSQEKLEFKLRLSIAQGAAKGLAHLHSLSPRLVHKDFKTANVLVDENFIAKVADAGLRNFLGRVDIAGSSSQVATDEIFLASEVREFRRFSEKSDVYSFGVFLLELLSGKEAIESPFPEANENLVEWVVSNQDRGMMSYIIDRRLESSFTAEGMEEYIMLIIRCLDPSRNELDNNHGRRNPNCDSWKPVIQINKIKKKENRTSCFLSV 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00733 373 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 336 - -
Cca07g00733 373 ProSitePatterns Protein kinases ATP-binding region signature. 84 107 IPR017441 GO:0005524
Cca07g00733 373 Gene3D Transferase(Phosphotransferase) domain 1 151 338 - -
Cca07g00733 373 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 1 336 - -
Cca07g00733 373 ProSiteProfiles Protein kinase domain profile. 78 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g00733 373 SUPERFAMILY Protein kinase-like (PK-like) 63 334 IPR011009 -
Cca07g00733 373 Gene3D Phosphorylase Kinase; domain 1 43 150 - -
Cca07g00733 373 Pfam Protein tyrosine and serine/threonine kinase 82 299 IPR001245 GO:0004672|GO:0006468
Cca07g00733 373 ProSitePatterns Serine/Threonine protein kinases active-site signature. 197 209 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00733 Cca-Chr7 11285429 11288325 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00733 64 335 Receptor kinase-like Gene Family AT1G30570 40.860 5.90e-59 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXa Cca07g00733 PK_Tyr_Ser-Thr 8.2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00733 - - gmx:100305436 602.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00733 07 11285429 11288325 Cca07g00733 07 11285429 11288325 ECH