Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca07g00722 | ATGAACCCGCGCGTGACGACGTCGTCTAAGGCGAAGAAGAAGGCGGAAGAGAGCCAAACGGCGTGGGGAGGGAGGTACCTCGGGGTGAGGCGGAGGCCTTGGGGAAGGTACGCGGCGGAGATCCGCGACCCTGCCACCAAGGAGCGCCATTGGCTCGGTACTTTCGACACTGCCGAGGAAGCCGCACTGGCTTACGATAGAGCCGCACGTGCCATGCGCGGCTCACGTGCGCGCACTAACTTTGTCTACGCTGACACCACACCCGGCTCCTCCGTCACACCTATCCTCTCGCCCGACCAACCACCGCTCATCCAACCCGACCCTCTTCTCACGGTCGACCCGTTTTCCCTCCTCGGGATTCCCTCCGGTTCTTGTTCCTACGGTTATGAACATGAACGTGCCTCTGCCAGCGTGGCTAGTTCCCAGTTTAGCCAACAAGTGTTTTTCACGGataataataatattaatgataatgatataaataataataataataataataataataataataaAGAAAGTGGTAACACGATAGAGCTTCCTCCGTTGCCACCGGATATTACTAGCTCCATGGGTTACGAAACGGAACAGGGTTATGGATTTTATAATAGTGATATTAGTGGGTTTAATTATAATTACGTGGAGGATAATTACTCGCTTAGTCCAATGTTTGGTGCAATGGCAGAGAATGTGGATGCAGGGTCTCAAGTTTATGACTTCGGAAGCTCCTCCTATTTCTTTTGA | 744 | 0.4973 | MNPRVTTSSKAKKKAEESQTAWGGRYLGVRRRPWGRYAAEIRDPATKERHWLGTFDTAEEAALAYDRAARAMRGSRARTNFVYADTTPGSSVTPILSPDQPPLIQPDPLLTVDPFSLLGIPSGSCSYGYEHERASASVASSQFSQQVFFTDNNNINDNDINNNNNNNNNNNKESGNTIELPPLPPDITSSMGYETEQGYGFYNSDISGFNYNYVEDNYSLSPMFGAMAENVDAGSQVYDFGSSSYFF | 247 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca07g00722 | 247 | Pfam | AP2 domain | 26 | 74 | IPR001471 | GO:0003700|GO:0006355 | |
Cca07g00722 | 247 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR LEP | 7 | 247 | - | - | |
Cca07g00722 | 247 | SUPERFAMILY | DNA-binding domain | 25 | 82 | IPR016177 | GO:0003677 | |
Cca07g00722 | 247 | SMART | rav1_2 | 25 | 88 | IPR001471 | GO:0003700|GO:0006355 | |
Cca07g00722 | 247 | MobiDBLite | consensus disorder prediction | 153 | 177 | - | - | |
Cca07g00722 | 247 | CDD | AP2 | 25 | 81 | IPR001471 | GO:0003700|GO:0006355 | |
Cca07g00722 | 247 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Cca07g00722 | 247 | PRINTS | Ethylene responsive element binding protein signature | 26 | 37 | IPR001471 | GO:0003700|GO:0006355 | |
Cca07g00722 | 247 | PRINTS | Ethylene responsive element binding protein signature | 48 | 64 | IPR001471 | GO:0003700|GO:0006355 | |
Cca07g00722 | 247 | ProSiteProfiles | AP2/ERF domain profile. | 25 | 82 | IPR001471 | GO:0003700|GO:0006355 | |
Cca07g00722 | 247 | MobiDBLite | consensus disorder prediction | 153 | 179 | - | - | |
Cca07g00722 | 247 | Gene3D | AP2/ERF domain | 24 | 83 | IPR036955 | GO:0003700|GO:0006355 | |
Cca07g00722 | 247 | PANTHER | AP2 DOMAIN CLASS TRANSCRIPTION FACTOR | 7 | 247 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca07g00722 | Cca-Chr7 | 11011819 | 11012817 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca07g00722 | 6 | 97 | AP2-EREBP Transcription Factor Family | AT5G13910 | 78.261 | 2.29e-45 | 149 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-ERF | Cca07g00722 | AP2 | 4e-13 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca07g00722 | K09286 | - | gmx:100792421 | 241.121 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Cca07g00722 | 07 | 11011819 | 11012817 | Cca07g00722 | 07 | 11011819 | 11012817 | ECH | |
Cca07g00722 | 07 | 11011819 | 11012817 | Cca08g01025 | 08 | 26010813 | 26011757 | PCT |