Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00703 ATGGAAACCTCTTGCCTAGAATCTCCACCACTTCTTCAAGACATGAAAGTAACCATCCACGAAACTTCAATGGTTTTTCCTTCCAAAGAAACTCACCAGAAGTCCTTGTTCCTATCGAACATAGACAAGGTCCTCAACTTGGACGTGGAAACGGTTCACTTCTTTGCAGCAAACAAAGACTTTTCACCTCAGAAAGTGGCCGAGATGTTCAAGAACGCTCTAGAGGATTCTCTAGTGGTCTATGACTTCTTAGGTGGAAGATTGAAGCTGAACTCCAAAACCAACAGATTGGAGATAGATTGCAACGCAGAGGGTGCTGGCTTTGTGGTGGCTTCATGTGAATACAAGTTGAGTGAGATTGGGGACTTGGTTTATCCCAATCCAGCTTTTGCAAAATTTGTTCACAAGAGTAAGGATTTTCTTAAACCAGGTGATCAACCACTATGCGTTGCACAGCTGACATCTTTCAAATGTGGTGGCTTCGCAATCGGGTTCACAACCAGTCATACCACCTTCGACGGACTCAGCTTCAAAACTTTCTTAGACAACCTCGCCGCGTTGGCTGCTAACAAGCCCTTGGCTGTGATACCATGCCACGACAGGCACCTCCTGGCCGCACGATCTCCGCCACGTGTCAGCTTTCCACACCCCGAGTTGATCAAGCTCGGTAACCTACCCACAGGCCCCGAGTCCGGGGTCTTCGAGGCCTCCAAAGAAGAACTCGACTTCAAGGTGTTCCAACTAACCTCAGACAACATCCTCAGCCTCAAGGAAAAAGCCATAGGTAGCAGCGGTTCCCGTGTCACCAGGTTTAACGTTGTCACCGCCCATGTATGGAGGTGCAAGGCGTTATCCGCACCGTACGATGCTGCTAGGGCATCCACCATACTATACGCCGTGGACATACGTTCACGGCTGAACCCTCCGCTGCCGAAAGGGTATGCCGGCAACGCGGTGTTGACGGCGTACGCGACAGCGGAGTGCGAGGAACTGGAGAAGGGTCCTTTGTCGAGGTTGGTGGAGATGGTGAGGGAGGGTACAATGAGAATGAGTGATGAGTATGCTAGGTCTATTATAGACTGGGGAGAGATGAATGAGGGGTTTCCACATATCTTGTGA 1119 0.4996 METSCLESPPLLQDMKVTIHETSMVFPSKETHQKSLFLSNIDKVLNLDVETVHFFAANKDFSPQKVAEMFKNALEDSLVVYDFLGGRLKLNSKTNRLEIDCNAEGAGFVVASCEYKLSEIGDLVYPNPAFAKFVHKSKDFLKPGDQPLCVAQLTSFKCGGFAIGFTTSHTTFDGLSFKTFLDNLAALAANKPLAVIPCHDRHLLAARSPPRVSFPHPELIKLGNLPTGPESGVFEASKEELDFKVFQLTSDNILSLKEKAIGSSGSRVTRFNVVTAHVWRCKALSAPYDAARASTILYAVDIRSRLNPPLPKGYAGNAVLTAYATAECEELEKGPLSRLVEMVREGTMRMSDEYARSIIDWGEMNEGFPHIL 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00703 372 Pfam Transferase family 15 364 - -
Cca07g00703 372 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 13 370 - -
Cca07g00703 372 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 13 370 - -
Cca07g00703 372 Gene3D - 13 220 IPR023213 -
Cca07g00703 372 Gene3D - 229 372 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00703 Cca-Chr7 10544558 10547480 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00703 15 365 Monolignol Biosynthesis Gene Families AT5G48930 32.964 7.41e-48 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00703 K13065 - gmx:100780971 613.224