Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00702 ATGCTGACATCTTTCAAATGTGGTGGCTTCGCAATCGGGTTCACAACCAGTCATACCACCTTCGACGGACTCAGCTTCAAAACTTTCTTAGACAACCTCGCCGCGTTGGCTGCTAACAAGCCCTTGGCTGTGATACCATGCCACGACAGGCACCTCCTGGCCGCACGATCTCCGCCACGTGTCAGCTTTCCACACCCCGAGTTGATCAAGCTCGGTAACCTACCCACAGGCCCCGAGTCCGGGGTCTTCGAGGCCTCCAAAGAAGAACTCGACTTCAAGGTGTTCCAACTAACCTCAGACAACATCCTCAGCCTCAAGGAAAAAGCCATAGGTAGCAGCGGTTCCCGTGTCACCAGGTTTAACGTTGTCACCGCCCATGTATGGAGGTGCAAGGCGTTATCCGCACCGTACGATGCTGCTAGGGCATCCACCATACTATACGCCGTGGACATACGTTTTAGatctagacctaagataacctaa 483 0.5176 MLTSFKCGGFAIGFTTSHTTFDGLSFKTFLDNLAALAANKPLAVIPCHDRHLLAARSPPRVSFPHPELIKLGNLPTGPESGVFEASKEELDFKVFQLTSDNILSLKEKAIGSSGSRVTRFNVVTAHVWRCKALSAPYDAARASTILYAVDIRFRSRPKIT 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00702 160 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 2 158 - -
Cca07g00702 160 Pfam Transferase family 3 158 - -
Cca07g00702 160 Gene3D - 1 69 IPR023213 -
Cca07g00702 160 Gene3D - 78 160 IPR023213 -
Cca07g00702 160 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 2 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00702 Cca-Chr7 10543339 10543971 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00702 2 159 Monolignol Biosynthesis Gene Families AT5G48930 31.707 3.13e-16 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00702 K13065 K15400 gmx:100780971 260.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00702 07 10543339 10543971 Cca08g01011 08 24757895 24764651 PCT