Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00697 ATGGTGGGTGCCATAAAAGCAGCGATTGGAGACGCAGTGTTGACTTTCATGTGGGTCTTCTGCTCCTCCCTGTTGGGAATAGCTTCCAGTGCCATAACCAAGGCTCTTGATCTTCAGCACCTCTCCTACAACGGCTTCCCCTACCCTTCGTTCCTCGTCACCACTACCCTCGTTTTCGCCCTCGTTTTTCTCTTCACCGTCATCGGCAATGCCTTCGGTGGCGCCAGCTTCAACCCCACCGGAACTGCCTCCTTTTACGCCGTTGGTCTCGGCTCCGACACGCTCTTCTCAATGGCGCTCAGGTTCCCTGCGCAGGCGGTTGGGGCTGCGGGTGGAGCAATGGCAATTATGGAAGTGATTCCTGCGGAATACAGGCACAAGATTGGGGGGCCTTCCTTGAAAGTGGACGTGCACACTGGGGCTGTGGCTGAAGGGGTGTTGACTTTTTTGATTACCTTTGCTGTTCTCTTAATCATCCTCAAGGGCCCTCGTAGTAATTTATTGAAGACTTGGTTGCTGGCGACAGCGACCGTAGCTTTGGTCATGGTTGGATCTGCCTACACTGGACCAGCCATGAATCCTGCCAATGCCTTTGGTTGGGCATACATGAACAACTTGCACAACACATGGGACCAATTCTATGTATACTGGATTTGCCCCTTCACTGGAGCAATATTGGCTGCTTGGCTGTTCCGAGCTATCTTCCCTCCACCACCACCAGAAGTAAAACAGAAGAAAGCATGA 744 0.5255 MVGAIKAAIGDAVLTFMWVFCSSLLGIASSAITKALDLQHLSYNGFPYPSFLVTTTLVFALVFLFTVIGNAFGGASFNPTGTASFYAVGLGSDTLFSMALRFPAQAVGAAGGAMAIMEVIPAEYRHKIGGPSLKVDVHTGAVAEGVLTFLITFAVLLIILKGPRSNLLKTWLLATATVALVMVGSAYTGPAMNPANAFGWAYMNNLHNTWDQFYVYWICPFTGAILAAWLFRAIFPPPPPEVKQKKA 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00697 247 SUPERFAMILY Aquaporin-like 4 242 IPR023271 -
Cca07g00697 247 Pfam Major intrinsic protein 4 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cca07g00697 247 PANTHER AQUAPORIN SIP1-1 3 246 - -
Cca07g00697 247 PANTHER AQUAPORIN SIP1-1 3 246 IPR044222 GO:0015250
Cca07g00697 247 Gene3D Glycerol uptake facilitator protein. 3 246 IPR023271 -
Cca07g00697 247 PRINTS Major intrinsic protein family signature 6 25 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cca07g00697 247 PRINTS Major intrinsic protein family signature 58 82 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cca07g00697 247 PRINTS Major intrinsic protein family signature 97 116 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cca07g00697 247 PRINTS Major intrinsic protein family signature 143 161 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cca07g00697 247 PRINTS Major intrinsic protein family signature 174 196 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cca07g00697 247 PRINTS Major intrinsic protein family signature 214 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00697 Cca-Chr7 10365434 10369638 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00697 2 247 Major Intrinsic Protein MIP AT5G18290 56.048 9.46e-85 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00697 K09875 - gmx:102669186 446.817